Barry Hughes

Persistent exclusion processes: Inertia, drift, mixing, and correlation

Stephen Zhang, Aaron Chong, Barry D Hughes

Journal article  |  2019  |  Physical Review E

EVOLUTION OF CANCER CELL POPULATIONS UNDER CYTOTOXIC THERAPY AND TREATMENT OPTIMISATION: INSIGHT FROM A PHENOTYPE-STRUCTURED MODEL

Luis Almeida, Patrizia Bagnerini, Giulia Fabrini, Barry D Hughes, Tommaso Lorenzi

Journal article  |  2019  |  ESAIM: Mathematical Modelling and Numerical Analysis

Publisher Correction: Interatomic force laws that evade dynamic measurement.

John E Sader, Barry D Hughes, Ferdinand Huber, Franz J Giessibl

Journal article  |  2019  |  Nature Nanotechnology

In the version of this Comment originally published, equation (4) was incorrect; see the correction notice for details. This has n..

Interatomic force laws that evade dynamic measurement

John E Sader, Barry D Hughes, Ferdinand Huber, Franz J Giessibl

Journal article  |  2018  |  Nature Nanotechnology

Why we do not expect dispersal probability density functions based on a single mechanism to fit real seed shadows

Roger D Cousens, Barry D Hughes, Mohsen B Mesgaran

Journal article  |  2018  |  Journal of Ecology

Watching the Internal Clock of Cells while They Move and Divide

Barry D Hughes

Journal article  |  2018  |  Biophysical Journal

Distinguishing cell shoving mechanisms

Pingyu Nan, Darragh M Walsh, Kerry A Landman, Barry D Hughes

Journal article  |  2018  |  PLOS ONE

On the Continuity of the Topological Entropy of Non-autonomous Dynamical Systems

Jeovanny de Jesus Muentes Acevedo

Journal article  |  2018  |  Bulletin of the Brazilian Mathematical Society, New Series

A Multicellular Model of Intestinal Crypt Buckling and Fission

Axel A Almet, Barry D Hughes, Kerry A Landman, Inke S Nathke, James M Osborne

Journal article  |  2018  |  Bulletin of Mathematical Biology

Infection-acquired versus vaccine-acquired immunity in an SIRWS model.

Tiffany Leung, Patricia T Campbell, Barry D Hughes, Federico Frascoli, James M McCaw

Journal article  |  2018  |  Infectious Disease Modelling

In some disease systems, the process of waning immunity can be subtle, involving a complex relationship between the duration of im..

Radio pulsar glitches as a state-dependent Poisson process

W Fulgenzi, A Melatos, BD Hughes

Journal article  |  2017  |  Monthly Notices of the Royal Astronomical Society

What is the optimal distribution of myelin along a single axon?

Darragh M Walsh, Kerry A Landman, Barry D Hughes

Journal article  |  2017  |  Neuroscience Letters

3D hybrid modelling of vascular network formation

Holger Perfahl, Barry D Hughes, Tomas Alarcon, Philip K Maini, Mark C Lloyd, Matthias Reuss, Helen M Byrne

Journal article  |  2017  |  Journal of Theoretical Biology

Periodic solutions in an SIRWS model with immune boosting and cross-immunity

Tiffany Leung, Barry D Hughes, Federico Frascoli, James M McCaw

Journal article  |  2016  |  Journal of Theoretical Biology

Evidence for Cooperative Selection of Axons for Myelination by Adjacent Oligodendrocytes in the Optic Nerve

Darragh M Walsh, Tobias D Merson, Kerry A Landman, Barry D Hughes

Journal article  |  2016  |  PLOS ONE

Is cell migration or proliferation dominant in the formation of linear arrays of oligodendrocytes?

Darragh M Walsh, Philipp T Roth, William R Holmes, Kerry A Landman, Tobias D Merson, Barry D Hughes

Journal article  |  2016  |  JOURNAL OF THEORETICAL BIOLOGY

Evolutionary dynamics of phenotype-structured populations: from individual-level mechanisms to population-level consequences

Rebecca H Chisholm, Tommaso Lorenzi, Laurent Desvillettes, Barry D Hughes

Journal article  |  2016  |  ZEITSCHRIFT FUR ANGEWANDTE MATHEMATIK UND PHYSIK

A correspondence principle

Barry D Hughes, Barry W Ninham

Journal article  |  2016  |  Physica A: Statistical Mechanics and its Applications

Dissecting the dynamics of epigenetic changes in phenotype-structured populations exposed to fluctuating environments

Tommaso Lorenzi, Rebecca H Chisholm, Laurent Desvillettes, Barry D Hughes

Journal article  |  2015  |  Journal of Theoretical Biology

When push comes to shove: Exclusion processes with nonlocal consequences

Axel A Almet, Michael Pan, Barry D Hughes, Kerry A Landman

Journal article  |  2015  |  Physica A: Statistical Mechanics and its Applications

Length-based connectivity metrics and their ecological interpretation

CM Baker, BD Hughes, KA Landman

Journal article  |  2015  |  Ecological Indicators

An In Silico Agent-Based Model Demonstrates Reelin Function in Directing Lamination of Neurons during Cortical Development

James R Caffrey, Barry D Hughes, Joanne M Britto, Kerry A Landman

Journal article  |  2014  |  PLoS ONE

Erosion by a one-dimensional random walk

Rebecca H Chisholm, Barry D Hughes, Kerry A Landman

Journal article  |  2014  |  Physical Review E

A dynamical model of tumour immunotherapy

Federico Frascoli, Peter S Kim, Barry D Hughes, Kerry A Landman

Journal article  |  2014  |  Mathematical Biosciences

Interacting motile agents: Taking a mean-field approach beyond monomers and nearest-neighbor steps

Catherine J Penington, Barry D Hughes, Kerry A Landman

Journal article  |  2014  |  Physical Review E

Conduction and diffusion in percolating systems

B HUGHES

Book Chapter  |  2014

Random walks in nonuniform environments with local dynamic interactions

Christopher M Baker, Barry D Hughes, Kerry A Landman

Journal article  |  2013  |  Physical Review E

Continuum models of cohesive stochastic swarms: The effect of motility on aggregation patterns

Barry D Hughes, Klemens Fellner

Journal article  |  2013  |  Physica D: Nonlinear Phenomena

Mathematical modelling of gubernaculum during inguino-scrotal migration shows limb bud characteristics

Rebecca H Chisholm, Barry D Hughes, Kerry A Landman, John M Hutson

Journal article  |  2013  |  Journal of Pediatric Surgery

Analytic Study of Three-Dimensional Single Cell Migration with and without Proteolytic Enzymes

Rebecca H Chisholm, Barry D Hughes, Kerry A Landman, Muhammad H Zaman

Journal article  |  2013  |  Cellular and Molecular Bioengineering

A Computational Model for Collective Cellular Motion in Three Dimensions: General Framework and Case Study for Cell Pair Dynamics

Federico Frascoli, Barry D Hughes, Muhammad H Zaman, Kerry A Landman

Journal article  |  2013  |  PLoS One

Collective motion of dimers

Catherine J Penington, Karolina Korvasova, Barry D Hughes, Kerry A Landman

Journal article  |  2012  |  Physical Review E

Effect of multiplicative noise on least-squares parameter estimation with applications to the atomic force microscope

John E Sader, Barry D Hughes, Julian A Sanelli, Evan J Bieske

Journal article  |  2012  |  Review of Scientific Instruments

Building macroscale models from microscale probabilistic models: A general probabilistic approach for nonlinear diffusion and multispecies phenomena

Catherine J Penington, Barry D Hughes, Kerry A Landman

Journal article  |  2011  |  Physical Review E

Distortion in the thermal noise spectrum and quality factor of nanomechanical devices due to finite frequency resolution with applications to the atomic force microscope

John E Sader, Julian Sanelli, Barry D Hughes, Jason P Monty, Evan J Bieske

Journal article  |  2011  |  Review of Scientific Instruments

Dispersal, settling and layer formation

James R Caffrey, Barry D Hughes, Kerry A Landman

Journal article  |  2011  |  Mathematical Biosciences

When are cellular oscillators sufficient for sequential segmentation?

Rebecca H Chisholm, Barry D Hughes, Kerry A Landman, Georg Mayer, Paul M Whitington

Journal article  |  2011  |  Journal of Theoretical Biology

Building a Morphogen Gradient without Diffusion in a Growing Tissue

Rebecca H Chisholm, Barry D Hughes, Kerry A Landman

Journal article  |  2010  |  PLoS One

Cell invasion with proliferation mechanisms motivated by time-lapse data

Matthew J Simpson, Kerry A Landman, Barry D Hughes

Journal article  |  2010  |  Physica A - Statistical Mechanics and its Applications

A model for mesoscale patterns in motile populations

Matthew J Simpson, Kerry A Landman, Barry D Hughes, Anthony E Fernando

Journal article  |  2010  |  Physica A - Statistical Mechanics and its Applications

Distinguishing between Directed and Undirected Cell Motility within an Invading Cell Population

Matthew J Simpson, Kerry A Landman, Barry D Hughes

Journal article  |  2009  |  Bulletin of Mathematical Biology

Pathlines in exclusion processes

Matthew J Simpson, Kerry A Landman, Barry D Hughes

Journal article  |  2009  |  Physical Review E

Multi-species simple exclusion processes

Matthew J Simpson, Kerry A Landman, Barry D Hughes

Journal article  |  2009  |  Physica A - Statistical and Theoretical Physics

Cell lineage tree models of neurogenesis

Jennifer L Slater, Kerry A Landman, Barry D Hughes, Qin Shen, Sally Temple

Journal article  |  2009  |  Journal of Theoretical Biology

Diffusing populations: Ghosts or folks?

M SIMPSON, B HUGHES, K LANDMAN

Journal article  |  2009  |  Australasian journal of engineering education

Conduction and diffusion in percolating systems

BD Hughes

Book Chapter  |  2009

New integer linear programming approaches for course timetabling

Natashia Boland, Barry D Hughes, Liam TG Merlot, Peter J Stuckey

Journal article  |  2008  |  Computers & Operations Research

T cell development in the thymus: From periodic seeding to constant output

Anna Q Cai, Kerry A Landman, Barry D Hughes, Colleen M Witt

Journal article  |  2007  |  Journal of Theoretical Biology

Travelling waves of attached and detached cells in a wound-healing cell migration assay

Kerry A Landman, Anna Q Cai, Barry D Hughes

Journal article  |  2007  |  Bulletin of Mathematical Biology

Simulating invasion with cellular automata: Connecting cell-scale and population-scale properties

Matthew J Simpson, Alistair Merrifield, Kerry A Landman, Barry D Hughes

Journal article  |  2007  |  Physical Review E

Multi-scale modeling of a wound-healing cell migration assay

Anna Q Cai, Kerry A Landman, Barry D Hughes

Journal article  |  2007  |  Journal of Theoretical Biology

Theoretical size distribution of fossil taxa: analysis of a null model

William J Reed, Barry D Hughes

Journal article  |  2007  |  Theoretical Biology and Medical Modelling

Looking inside an invasion wave of cells using continuum models: Proliferation is the key

Matthew J Simpson, Kerry A Landman, Barry D Hughes, Donald F Newgreen

Journal article  |  2006  |  Journal of Theoretical Biology

Evolving mortal networks

Jennifer L Slater, Barry D Hughes, Kerry A Landman

Journal article  |  2006  |  Physical Review E

Modelling directional guidance and motility regulation in cell migration

AQ Cai, KA Landman, BD Hughes

Journal article  |  2006  |  Bulletin of Mathematical Biology

The density of the time to ruin for a sparre andersen process with erlang arrivals and exponential claims

DCM Dickson, BD Hughes, Z Lianzeng

Journal article  |  2005  |  Scandinavian Actuarial Journal

A model explaining the size distribution of gene and protein families

WJ Reed, BD Hughes

Journal article  |  2004  |  Mathematical Biosciences

Stochastically evolving networks

DYC Chan, BD Hughes, AS Leong, WJ Reed

Journal article  |  2003  |  Physical Review E

On the distribution of family names

WJ Reed, BD Hughes

Journal article  |  2003  |  Physica A - Statistical and Theoretical Physics

A hybrid algorithm for the examination timetabling problem

LTG Merlot, N Boland, BD Hughes, PJ Stuckey

Conference Proceedings  |  2003  |  Lecture Notes in Computer Science: Practice and Theory of Automated Timetabling IV

Power-law distributions from exponential processes: an explanation for the occurrence of long-tailed distributions in biology and elsewhere

WJ REED, BD HUGHES

Conference Proceedings  |  2003  |  Scientiae Mathematicae Japonicae

From gene families and genera to incomes and internet file sizes: Why power laws are so common in nature

WJ Reed, BD Hughes

Journal article  |  2002  |  Physical Review E

On the size distribution of live genera

WJ Reed, BD Hughes

Journal article  |  2002  |  Journal of Theoretical Biology

Anomalous diffusion, stable processes, and generalized functions

BD Hughes

Journal article  |  2002  |  Physical Review E

Some applications of classical analysis in physics and physical chemistry

BD Hughes

Journal article  |  1997  |  Colloids and Surfaces A: Physicochemical and Engineering Aspects

Random Walks and Random Environments: Random environments

Barry D Hughes

Book  |  1996

This is the second volume of a two-volume work devoted to probability theory in physical chemistry, and engineering.

Random Walks and Random Environments: Random walks

Barry D Hughes

Book  |  1995

Volume 1.

ON THE STRESS DEPRESSION UNDER A SANDPILE

K LIFFMAN, DYC CHAN, BD HUGHES

Journal article  |  1994  |  Powder Technology

Surface energy of solids

M Yudin, BD Hughes

Journal article  |  1994  |  Physical Review B

NON-NEWTONIAN EFFECTS ON IMMISCIBLE VISCOUS FINGERING IN A RADIAL HELE-SHAW CELL

JE SADER, DYC CHAN, BD HUGHES

Journal article  |  1994  |  Physical Review E

TENSILE STRESSES AROUND BOREHOLES DUE TO TRANSIENT FLUID-FLOW

DYC CHAN, BD HUGHES, L PATERSON

Journal article  |  1993  |  International Journal for Numerical and Analytical Methods in Geomechanics

TRANSIENT GAS-FLOW AROUND BOREHOLES

DYC CHAN, BD HUGHES, L PATERSON

Journal article  |  1993  |  Transport in Porous Media

Stochastic transport in heterogeneous media with multiple families of transport paths

BD Hughes, M Sahimi

Journal article  |  1993  |  Physical Review E

Diffusion in disordered systems with multiple families of transport paths

BD Hughes, M Sahimi

Journal article  |  1993  |  Physical Review Letters

FORCE DISTRIBUTION IN A 2-DIMENSIONAL SANDPILE

K LIFFMAN, DYC CHAN, BD HUGHES

Journal article  |  1992  |  Powder Technology

Möbius, Mellin, and mathematical physics

BW Ninham, BD Hughes, NE Frankel, M Lawrence Glasser

Journal article  |  1992  |  Physica A: Statistical Mechanics and its Applications

RESISTOR NETWORKS WITH DISTRIBUTED BREAKDOWN VOLTAGES

DYC CHAN, BD HUGHES, L PATERSON, C SIRAKOFF

Journal article  |  1991  |  Physical Review A

CHEN INVERSION-FORMULA

BD HUGHES, NE FRANKEL, BW NINHAM

Journal article  |  1990  |  Physical Review A

Diffusion on two-dimensional random walks

SS Manna, AJ Guttmann, BD Hughes

Journal article  |  1989  |  Physical Review A

SIMULATING FLOW IN POROUS-MEDIA

DYC CHAN, BD HUGHES, L PATERSON, C SIRAKOFF

Journal article  |  1988  |  Physical Review A

ION DIFFUSION IN A COULOMBIC FIELD

DYC CHAN, BD HUGHES

Journal article  |  1988  |  Journal of Statistical Physics

FLUID CAPACITY DISTRIBUTIONS OF RANDOM POROUS-MEDIA

DYC CHAN, BD HUGHES, L PATERSON

Journal article  |  1988  |  Transport in Porous Media

TUNABLE NOISE

DYC CHAN, BD HUGHES, L PATERSON

Journal article  |  1987  |  Nature

A PHYSICALLY CONSISTENT THEORY OF FRACTURE IN A BRITTLE SOLID

DYC CHAN, BD HUGHES, LR WHITE

Journal article  |  1987  |  Journal of Colloid and Interface Science

FLUCTUATIONS, VISCOUS FINGERING, AND DIFFUSION-LIMITED AGGREGATION

DYC CHAN, BD HUGHES, L PATERSON

Journal article  |  1986  |  Physical Review A

Shear flow in the two-body Boltzmann gas. II. Small and large γ expansion of the shear viscosity

GP Morriss, DJ Isbister, BD Hughes

Journal article  |  1986  |  Journal of Statistical Physics

On returns to the starting site in lattice random walks

BD Hughes

Journal article  |  1986  |  Physica A: Statistical Mechanics and its Applications

DISPERSION IN FLOW THROUGH POROUS-MEDIA .1. ONE-PHASE FLOW

M SAHIMI, BD HUGHES, LE SCRIVEN, HT DAVIS

Journal article  |  1986  |  Chemical Engineering Science

Comment: On the potential due to a circular parallel plate capacitor

BD Hughes

Journal article  |  1984  |  Journal of Physics A: Mathematical and General

ON A RANDOM PROCESS INTERPOLATING BETWEEN MARKOVIAN AND NON-MARKOVIAN RANDOM-WALKS

DYC CHAN, BD HUGHES

Journal article  |  1984  |  Journal of Physics A: Mathematical and General

Transport and conduction in random systems

BD Hughes, M Sahimi, LE Scriven, HT Davis

Journal article  |  1984  |  International Journal of Engineering Science

Critical exponent of percolation conductivity by finite-size scaling

M Sahimi, BD Hughes, LE Scriven, HT Davis

Journal article  |  1983  |  Journal of Physics C: Solid State Physics

STATISTICAL MECHANICS OF EARLY GROWTH OF FATIGUE CRACKS.

WJ Pardee, WL Morris, BN Cox, BD Hughes

Conference Proceedings  |  1983

On Polya random walks, lattice Green functions, and the bond percolation threshold

M Sahimi, BD Hughes, LE Scriven, HT Davis

Journal article  |  1983  |  Journal of Physics A: Mathematical and General

Fractal and lacunary stochastic processes

BD Hughes, EW Montroll, MF Shlesinger

Journal article  |  1983  |  Journal of Statistical Physics

STOCHASTIC TRANSPORT IN DISORDERED-SYSTEMS

M SAHIMI, BD HUGHES, LE SCRIVEN, HT DAVIS

Journal article  |  1983  |  The Journal of Chemical Physics

Real-space renormalization and effective-medium approximation to the percolation conduction problem

M Sahimi, BD Hughes, LE Scriven, HT Davis

Journal article  |  1983  |  Physical Review B

Random walks on pseudo-lattices

BD Hughes, M Sahimi, H Ted Davis

Journal article  |  1983  |  Physica A: Statistical Mechanics and its Applications

Fractal random walks

BD Hughes, EW Montroll, MF Shlesinger

Journal article  |  1982  |  Journal of Statistical Physics

RANDOM-WALKS ON THE BETHE LATTICE

BD HUGHES, M SAHIMI

Journal article  |  1982  |  Journal of Statistical Physics

EXTRACTION OF MEMBRANE MICRO-VISCOSITY FROM TRANSLATIONAL AND ROTATIONAL DIFFUSION-COEFFICIENTS

BD HUGHES, BA PAILTHORPE, LR WHITE, WH SAWYER

Journal article  |  1982  |  Biophysical Journal

We report the exact calculation of the Stokes drag for cylindrical particles diffusing in Saffman's model membrane. Simultaneous p..

Dispersion in flow through porous media

M Sahimi, AA Heiba, BD Hughes, HT Davis, LE Scriven

Conference Proceedings  |  1982  |  Proceedings - SPE Annual Technical Conference and Exhibition

Lattice dynamics, random walks, and nonintegral effective dimensionality

BD Hughes, MF Shlesinger

Journal article  |  1981  |  Journal of Mathematical Physics

THE TRANSLATIONAL AND ROTATIONAL DRAG ON A CYLINDER MOVING IN A MEMBRANE

BD HUGHES, BA PAILTHORPE, LR WHITE

Journal article  |  1981  |  Journal of Fluid Mechanics

The translational and rotational drag coefficients for a cylinder undergoing uniform translational and rotational motion in a mode..

ANALOGS OF RENORMALIZATION-GROUP TRANSFORMATIONS IN RANDOM-PROCESSES

MF SHLESINGER, BD HUGHES

Journal article  |  1981  |  Physica A: Statistical Mechanics and its Applications

IMPLICATIONS OF ELASTIC-DEFORMATION ON THE DIRECT MEASUREMENT OF SURFACE FORCES

BD HUGHES, LR WHITE

Journal article  |  1980  |  Journal of the Chemical Society, Faraday Transactions 1: Physical Chemistry in Condensed Phases

Analytic approximations for the elastic contact of rough spheres

BD Hughes, LR White

Journal article  |  1980  |  Journal of Applied Mechanics

SOFT CONTACT PROBLEMS IN LINEAR ELASTICITY

BD HUGHES, LR WHITE

Journal article  |  1979  |  The Quarterly Journal of Mechanics and Applied Mathematics