Jane Elith

Testing whether ensemble modelling is advantageous for maximising predictive performance of species distribution models

Tianxiao Hao, Jane Elith, Jose J Lahoz-Monfort, Gurutzeta Guillera-Arroita

Journal article  |  2020  |  Ecography

A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels

Anna Norberg, Nerea Abrego, F Guillaume Blanchet, Frederick R Adler, Barbara J Anderson, Jani Anttila, Miguel B Araujo, Tad Dallas, David Dunson, Jane Elith, Scott D Foster, Richard Fox, Janet Franklin, William Godsoe, Antoine Guisan, Bob O'Hara, Nicole A Hill, Robert D Holt, Francis KC Hui, Magne Husby, et al.

Journal article  |  2019  |  Ecological Monographs

Forecasting species range dynamics with process-explicit models: matching methods to applications

Natalie J Briscoe, Jane Elith, Roberto Salguero-Gomez, Jose J Lahoz-Monfort, James S Camac, Katherine M Giljohann, Matthew H Holden, Bronwyn A Hradsky, Michael R Kearney, Sean M McMahon, Ben L Phillips, Tracey J Regan, Jonathan R Rhodes, Peter A Vesk, Brendan A Wintle, Jian DL Yen, Gurutzeta Guillera-Arroita

Journal article  |  2019  |  Ecology Letters

Knowing where species occur is fundamental to many ecological and environmental applications. Species distribution models (SDMs) a..

The influence of data source and species distribution modelling method on spatial conservation priorities

William La Marca, Jane Elith, Ronald SC Firth, Brett P Murphy, Tracey J Regan, John CZ Woinarski, Emily Nicholson

Journal article  |  2019  |  Diversity and Distributions

Modelling the distribution of Shorea leprosula in Kalimantan, Indonesia: A tool for conservation planning

NS Lestari, J Elith

Conference Proceedings  |  2019  |  IOP Conference Series: Earth and Environmental Science

A review of evidence about use and performance of species distribution modelling ensembles like BIOMOD

Tianxiao Hao, Jane Elith, Gurutzeta Guillera-Arroita, Jose J Lahoz-Monfort

Journal article  |  2019  |  Diversity and Distributions

blockCV: An r package for generating spatially or environmentally separated folds for k-fold cross-validation of species distribution models

Roozbeh Valavi, Jane Elith, Jose J Lahoz-Monfort, Gurutzeta Guillera-Arroita

Journal article  |  2019  |  Methods in Ecology and Evolution

Machine Learning, Random Forests, and Boosted Regression Trees

Jane Elith

Book Chapter  |  2019

Open access solutions for biodiversity journals: Do not replace one problem with another

A Townsend Peterson, Robert P Anderson, Maria Beger, Janine Bolliger, Lluis Brotons, Christopher P Burridge, Marlon E Cobos, Angela P Cuervo-Robayo, Enrico Di Minin, Jeffrey Diez, Jane Elith, Clare B Embling, Luis E Escobar, Franz Essl, Kenneth J Feeley, Lucy Hawkes, Daniel Jimenez-Garcia, Laura Jimenez, David M Green, Eva Knop, et al.

Journal article  |  2019  |  Diversity and Distributions

Not all data are equal: Influence of data type and amount in spatial conservation prioritisation

Heini Kujala, Jose Joaquin Lahoz-Monfort, Jane Elith, Atte Moilanen

Journal article  |  2018  |  Methods in Ecology and Evolution

Model averaging in ecology: a review of Bayesian, information-theoretic, and tactical approaches for predictive inference

Carsten F Dormann, Justin M Calabrese, Gurutzeta Guillera-Arroita, Eleni Matechou, Volker Bahn, Kamil Barton, Colin M Beale, Simone Ciuti, Jane Elith, Katharina Gerstner, Jerome Guelat, Petr Keil, Jose J Lahoz-Monfort, Laura J Pollock, Bjoern Reineking, David R Roberts, Boris Schroeder, Wilfried Thuiller, David I Warton, Brendan A Wintle, et al.

Journal article  |  2018  |  Ecological Monographs

Outstanding Challenges in the Transferability of Ecological Models

Katherine L Yates, Phil J Bouchet, M Julian Caley, Kerrie Mengersen, Christophe F Randin, Stephen Parnell, Alan H Fielding, Andrew J Bamford, Stephen Ban, A Marcia Barbosa, Carsten F Dormann, Jane Elith, Clare B Embling, Gary N Ervin, Rebecca Fisher, Susan Gould, Roland F Graf, Edward J Gregr, Patrick N Halpin, Risto K Heikkinen, et al.

Journal article  |  2018  |  Trends in Ecology & Evolution

A comparison of resampling methods for remote sensing classification and accuracy assessment

Mitchell B Lyons, David A Keith, Stuart R Phinn, Tanya J Mason, Jane Elith

Journal article  |  2018  |  Remote Sensing of Environment

Building essential biodiversity variables (EBVs) of species distribution and abundance at a global scale

W Daniel Kissling, Jorge A Ahumada, Anne Bowser, Miguel Fernandez, Nestor Fernandez, Enrique Alonso Garcia, Robert P Guralnick, Nick JB Isaac, Steve Kelling, Wouter Los, Louise McRae, Jean-Baptiste Mihoub, Matthias Obst, Monica Santamaria, Andrew K Skidmore, Kristen J Williams, Donat Agosti, Daniel Amariles, Christos Arvanitidis, Lucy Bastin, et al.

Journal article  |  2018  |  Biological Reviews

Cross-validation strategies for data with temporal, spatial, hierarchical, or phylogenetic structure

David R Roberts, Volker Bahn, Simone Ciuti, Mark S Boyce, Jane Elith, Gurutzeta Guillera-Arroita, Severin Hauenstein, Jose J Lahoz-Monfort, Boris Schroeder, Wilfried Thuiller, David I Warton, Brendan A Wintle, Florian Hartig, Carsten F Dormann

Journal article  |  2017  |  Ecography

Evaluating 318 continental-scale species distribution models over a 60-year prediction horizon: what factors influence the reliability of predictions?

Alejandra Moran-Ordonez, Jose J Lahoz-Monfort, Jane Elith, Brendan A Wintle

Journal article  |  2017  |  Global Ecology and Biogeography

Predicting Distributions of Invasive Species

Jane Elith

Book Chapter  |  2017

Box 2.3 Species Distribution Models

J Elith

Book Chapter  |  2016

A comprehensive guide to the proactive management of alien plants, synthesising the most current global theory and best management..

Green Infrastructure Design Based on Spatial Conservation Prioritization and Modeling of Biodiversity Features and Ecosystem Services

Tord Snall, Joona Lehtomaki, Anni Arponen, Jane Elith, Atte Moilanen

Journal article  |  2016  |  Environmental Management

Testing a model of biological soil crust succession

Cassia F Read, Jane Elith, Peter A Vesk

Journal article  |  2016  |  Journal of Vegetation Science

Interactive effects of climate change and fire on metapopulation viability of a forest-dependent frog in south-eastern Australia

TD Penman, DA Keith, J Elith, MJ Mahony, R Tingley, JB Baumgartner, TJ Regan

Journal article  |  2015  |  Biological Conservation

Point process models for presence-only analysis

Ian W Renner, Jane Elith, Adrian Baddeley, William Fithian, Trevor Hastie, Steven J Phillips, Gordana Popovic, David I Warton

Journal article  |  2015  |  Methods in Ecology and Evolution

Bias correction in species distribution models: pooling survey and collection data for multiple species

William Fithian, Jane Elith, Trevor Hastie, David A Keith

Journal article  |  2015  |  Methods in Ecology and Evolution

Is my species distribution model fit for purpose? Matching data and models to applications

Gurutzeta Guillera-Arroita, Jose J Lahoz-Monfort, Jane Elith, Ascelin Gordon, Heini Kujala, Pia E Lentini, Michael A McCarthy, Reid Tingley, Brendan A Wintle

Journal article  |  2015  |  Global Ecology and Biogeography

What do we gain from simplicity versus complexity in species distribution models?

Cory Merow, Mathew J Smith, Thomas C Edwards, Antoine Guisan, Sean M McMahon, Signe Normand, Wilfried Thuiller, Rafael O Wueest, Niklaus E Zimmermann, Jane Elith

Journal article  |  2014  |  Ecography

Biocrust morphogroups provide an effective and rapid assessment tool for drylands

Cassia F Read, David H Duncan, Peter A Vesk, Jane Elith

Journal article  |  2014  |  Journal of Applied Ecology

Maxent is not a presence-absence method: a comment on Thibaud et al.

Gurutzeta Guillera-Arroita, Jose J Lahoz-Monfort, Jane Elith

Journal article  |  2014  |  Methods in Ecology and Evolution

Response to Kriticos et al.

Jane Elith, MA Burgman

Journal article  |  2014  |  NeoBiota

Detecting Extinction Risk from Climate Change by IUCN Red List Criteria

David A Keith, Michael Mahony, Harry Hines, Jane Elith, Tracey J Regan, John B Baumgartner, David Hunter, Geoffrey W Heard, Nicola J Mitchell, Kirsten M Parris, Trent Penman, Ben Scheele, Christopher C Simpson, Reid Tingley, Christopher R Tracy, Matt West, H Resit Akcakaya

Journal article  |  2014  |  Conservation Biology

Predicting distribution changes of a mire ecosystem under future climates

David A Keith, Jane Elith, Christopher C Simpson

Journal article  |  2014  |  Diversity and Distributions

Predicting species distributions for conservation decisions

Antoine Guisan, Reid Tingley, John B Baumgartner, Ilona Naujokaitis-Lewis, Patricia R Sutcliffe, Ayesha IT Tulloch, Tracey J Regan, Lluis Brotons, Eve McDonald-Madden, Chrystal Mantyka-Pringle, Tara G Martin, Jonathan R Rhodes, Ramona Maggini, Samantha A Setterfield, Jane Elith, Mark W Schwartz, Brendan A Wintle, Olivier Broennimann, Mike Austin, Simon Ferrier, et al.

Journal article  |  2013  |  Ecology Letters

On estimating probability of presence from use-availability or presence-background data

Steven J Phillips, Jane Elith

Journal article  |  2013  |  Ecology

Improving decisions for invasive species management: reformulation and extensions of the Panetta-Lawes eradication graph

Mark A Burgman, Michael A McCarthy, Andrew Robinson, Susan M Hester, Marissa F McBride, Jane Elith, F Dane Panetta

Journal article  |  2013  |  Diversity and Distributions

Species Distribution Modeling

J Elith, J Franklin

Book Chapter  |  2013

Collinearity: a review of methods to deal with it and a simulation study evaluating their performance

Carsten F Dormann, Jane Elith, Sven Bacher, Carsten Buchmann, Gudrun Carl, Gabriel Carre, Jaime R Garcia Marquez, Bernd Gruber, Bruno Lafourcade, Pedro J Leitao, Tamara Muenkemueller, Colin McClean, Patrick E Osborne, Bjoern Reineking, Boris Schroeder, Andrew K Skidmore, Damaris Zurell, Sven Lautenbach

Journal article  |  2013  |  Ecography

Taxonomic uncertainty and decision making for biosecurity: spatial models for myrtle/guava rust

J Elith, J Simpson, M Hirsch, MA Burgman

Journal article  |  2013  |  Australasian Plant Pathology

Satellite surface reflectance improves habitat distribution mapping: a case study on heath and shrub formations in the Cantabrian Mountains (NW Spain)

Alejandra Moran-Ordonez, Susana Suarez-Seoane, Jane Elith, Leonor Calvo, Estanislao de Luis

Journal article  |  2012  |  Diversity and Distributions

Predicting to new environments: tools for visualizing model behaviour and impacts on mapped distributions

Damaris Zurell, Jane Elith, Boris Schroeder

Journal article  |  2012  |  Diversity and Distributions

Plant extinction risk under climate change: are forecast range shifts alone a good indicator of species vulnerability to global warming?

Damien A Fordham, H Resit Akcakaya, Miguel B Araujo, Jane Elith, David A Keith, Richard Pearson, Tony D Auld, Camille Mellin, John W Morgan, Tracey J Regan, Mark Tozer, Michael J Watts, Matthew White, Brendan A Wintle, Colin Yates, Barry W Brook

Journal article  |  2012  |  Global Change Biology

Spatial data for modelling and management of freshwater ecosystems

Yung En Chee, Jane Elith

Journal article  |  2012  |  International Journal of Geographical Information Science

Understanding niche shifts: using current and historical data to model the invasive redlegged earth mite, Halotydeus destructor

M HILL, AA Hoffmann, S Macfadyen, PA Umina, J Elith

Journal article  |  2012  |  Diversity and Distributions

Logistic methods for resource selection functions and presence-only species distribution models

SJ Phillips, J Elith

Conference Proceedings  |  2011  |  Proceedings of the National Conference on Artificial Intelligence

Pushing the limits in marine species distribution modelling: lessons from the land present challenges and opportunities

LM Robinson, J Elith, AJ Hobday, RG Pearson, BE Kendall, HP Possingham, AJ Richardson

Journal article  |  2011  |  Global Ecology and Biogeography

Surprisingly fast recovery of biological soil crusts following livestock removal in southern Australia

Cassia F Read, David H Duncan, Peter A Vesk, Jane Elith

Journal article  |  2011  |  Journal of Vegetation Science

Determinants of reproductive success in dominant pairs of clownfish: a boosted regression tree analysis

Peter M Buston, Jane Elith

Journal article  |  2011  |  Journal of Animal Ecology

Use of generalised dissimilarity modelling to improve the biological discrimination of river and stream classifications

JR Leathwick, T Snelder, WL Chadderton, J Elith, K Julian, S Ferrier

Journal article  |  2011  |  Freshwater Biology

A statistical explanation of MaxEnt for ecologists

Jane Elith, Steven J Phillips, Trevor Hastie, Miroslav Dudik, Yung En Chee, Colin J Yates

Journal article  |  2011  |  Diversity and Distributions

Alien invaders and reptile traders: what drives the live animal trade in South Africa?

NJ van Wilgen, JRU Wilson, J Elith, BA Wintle, DM Richardson

Journal article  |  2010  |  Animal Conservation

The art of modelling range-shifting species

Jane Elith, Michael Kearney, Steven Phillips

Journal article  |  2010  |  Methods in Ecology and Evolution

Uniting marine and terrestrial modelling of biodiversity under climate change

Karel Mokany, Anthony J Richardson, Elvira S Poloczanska, Simon Ferrier

Journal article  |  2010  |  Trends in Ecology & Evolution

POC plots: calibrating species distribution models with presence-only data

Steven J Phillips, Jane Elith

Journal article  |  2010  |  Ecology

Projecting climate change impacts on species distributions in megadiverse South African Cape and Southwest Australian Floristic Regions: Opportunities and challenges

Colin J Yates, Jane Elith, Andrew M Latimer, David Le Maitre, Guy F Midgley, Frank M Schurr, Adam G West

Journal article  |  2010  |  Austral Ecology

Assessing the impacts of climate change and land transformation on Banksia in the South West Australian Floristic Region

Colin J Yates, Asha McNeill, Jane Elith, Guy F Midgley

Journal article  |  2010  |  Diversity and Distributions

Presence-Only Data and the EM Algorithm

Gill Ward, Trevor Hastie, Simon Barry, Jane Elith, John R Leathwick

Journal article  |  2009  |  Biometrics

Robust planning for restoring diadromous fish species in New Zealand's lowland rivers and streams

JR Leathwick, J Elith, D Rowe, K Julian

Journal article  |  2009  |  New Zealand Journal of Marine and Freshwater Research

Do they? How do they? WHY do they differ? On finding reasons for differing performances of species distribution models

Jane Elith, Catherine H Graham

Journal article  |  2009  |  Ecography

Sample selection bias and presence-only distribution models: implications for background and pseudo-absence data

Steven J Phillips, Miroslav Dudik, Jane Elith, Catherine H Graham, Anthony Lehmann, John Leathwick, Simon Ferrier

Journal article  |  2009  |  Ecological Applications

The contribution of species distribution modelling to conservation prioritization

R ELITH, JR Leathwick

Book Chapter  |  2009

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

Jane Elith, John R Leathwick

Journal article  |  2009  |  Annual Review of Ecology, Evolution and Systematics

Biological soil crust distribution is related to patterns of fragmentation and landuse in a dryland agricultural landscape of southern Australia

Cassia F Read, David H Duncan, Peter A Vesk, Jane Elith

Journal article  |  2008  |  Landscape Ecology

Effects of sample size on the performance of species distribution models

MS Wisz, RJ Hijmans, J Li, AT Peterson, CH Graham, A Guisan

Journal article  |  2008  |  Diversity and Distributions

Dispersal, disturbance and the contrasting biogeographies of New Zealand's diadromous and non-diadromous fish species

JR Leathwick, J Elith, WL Chadderton, D Rowe, T Hastie

Journal article  |  2008  |  Journal of Biogeography

A working guide to boosted regression trees

J Elith, JR Leathwick, T Hastie

Journal article  |  2008  |  Journal of Animal Ecology

Novel methods for the design and evaluation of marine protected areas in offshore waters

John Leathwick, Atte Moilanen, Malcolm Francis, Jane Elith, Paul Taylor, Kathryn Julian, Trevor Hastie, Clinton Duffy

Journal article  |  2008  |  Conservation Letters

A method for spatial freshwater conservation prioritization

Atte Moilanen, John Leathwick, Jane Elith

Journal article  |  2008  |  Freshwater Biology

The influence of spatial errors in species occurrence data used in distribution models

Catherine H Graham, Jane Elith, Robert J Hijmans, Antoine Guisan, A Townsend Peterson, Bette A Loiselle

Journal article  |  2008  |  Journal of Applied Ecology

What matters for predicting the occurrences of trees: Techniques, data, or species' characteristics?

A Guisan, NE Zimmermann, J Elith, CH Graham, S Phillips, AT Peterson

Journal article  |  2007  |  Ecological Monographs

Sensitivity of predictive species distribution models to change in grain size

Antoine Guisan, Catherine H Graham, Jane Elith, Falk Huettmann

Journal article  |  2007  |  Diversity and Distributions

Using generalized dissimilarity modelling to analyse and predict patterns of beta diversity in regional biodiversity assessment

Simon Ferrier, Glenn Manion, Jane Elith, Karen Richardson

Journal article  |  2007  |  Diversity and Distributions

Predicting species distributions from museum and herbarium records using multiresponse models fitted with multivariate adaptive regression splines

Jane Elith, John Leathwick

Journal article  |  2007  |  Diversity and Distributions

Tools for Conserving Managing Individual Plant Species in Dynamic Landscapes

Mark Burgman, Jane Elith, Emma Gorrod, Bonnie Wintle

Book Chapter  |  2007

Spatial Management Model of Murray-Darling Fish Populations. Report to the Murray-Darling Basin Commission, Native Fish Strategy.

B Cant, R ELITH, J Leathwick, YE CHEE, J Taranto, M Case, J Pritchard

Report  |  2007

Uncertainty analysis for regional-scale reserve selection

Atte Moilanen, Brendan A Wintle, Jane Elith, Mark Burgman

Journal article  |  2006  |  Conservation Biology

Comparing species abundance models

Joanne M Potts, Jane Elith

Journal article  |  2006  |  Ecological Modelling

Comparative performance of generalized additive models and multivariate adaptive regression splines for statistical modelling of species distributions

JR Leathwick, J Elith, T Hastie

Journal article  |  2006  |  Ecological Modelling

Planning for robust reserve networks using uncertainty analysis

Atte Moilanen, Michael C Runge, Jane Elith, Andrew Tyre, Yohay Carmel, Eric Fegraus, Brendan A Wintle, Mark Burgman, Yakov Ben-Haim

Journal article  |  2006  |  Ecological Modelling

Error and uncertainty in habitat models

Simon Barry, Jane Elith

Journal article  |  2006  |  Journal of Applied Ecology

Novel methods improve prediction of species' distributions from occurrence data

J Elith, CH Graham, RP Anderson, M Dudik, S Ferrier, A Guisan, RJ Hijmans, F Huettmann, JR Leathwick, A Lehmann, J Li, LG Lohmann, BA Loiselle, G Manion, C Moritz, M Nakamura, Y Nakazawa, JM Overton, AT Peterson, SJ Phillips, et al.

Journal article  |  2006  |  Ecography

Variation in demersal fish species richness in the oceans surrounding New Zealand: an analysis using boosted regression trees

JR Leathwick, J Elith, MP Francis, T Hastie, P Taylor

Journal article  |  2006  |  Marine Ecology - Progress Series

Using multivariate adaptive regression splines to predict the distributions of New Zealand's freshwater diadromous fish

JR Leathwick, D Rowe, J Richardson, J Elith, T Hastie

Journal article  |  2005  |  Freshwater Biology

Fauna habitat modelling and mapping: A review and case study in the Lower Hunter Central Coast region of NSW

BA Wintle, J Elith, JM Potts

Journal article  |  2005  |  Austral Ecology

The evaluation strip: A new and robust method for plotting predicted responses from species distribution models

J Elith, S Ferrier, F Huettmann, J Leathwick

Journal article  |  2005  |  Ecological Modelling

Managing landscapes for conservation under uncertainty

MA Burgman, DB Lindenmayer, J Elith

Journal article  |  2005  |  Ecology

Sensitivity of conservation planning to different approaches to using predicted species distribution data

KA Wilson, MI Westphal, HP Possingham, J Elith

Journal article  |  2005  |  Biological Conservation

Eliciting and integrating expert knowledge for wildlife habitat modelling

K Yamada, J Elith, M McCarthy, A Zerger

Journal article  |  2003  |  Ecological Modelling

Habitat models for population viability analysis

RJ ELITH, MA BURGMAN

Book Chapter  |  2003

Mapping epistemic uncertainties and vague concepts in predictions of species distribution

J Elith, MA Burgman, HM Regan

Journal article  |  2002  |  Ecological Modelling

Predictions and their validation: Rare plants in the Central Highlands, Victoria, Australia

J Elith, M Burgman

Book Chapter  |  2002

Species mapping for conservation

M MCCARTHY, R ELITH

Journal article  |  2002  |  Gap Analysis Bulletin