Julie Sheridan

Isolation and Propagation of Mammary Epithelial Stem and Progenitor Cells.

Julie M Sheridan, Jane E Visvader

Journal article  |  2019  |  Methods in molecular biology (Clifton, N.J.)

Several methods of mammary gland dissociation have been described that utilize a combined strategy of mechanical and enzymatic dis..

A critical epithelial survival axis regulated by MCL-1 maintains thymic function in mice

Reema Jain, Julie M Sheridan, Antonia Policheni, Melanie Heinlein, Luke C Gandolfo, Grant Dewson, Gordon K Smyth, Stephen N Sansom, Nai Yang Fu, Jane E Visvader, Georg A Hollander, Andreas Strasser, Daniel HD Gray

Journal article  |  2017  |  Blood

Thymospheres Are Formed by Mesenchymal Cells with the Potential to Generate Adipocytes, but Not Epithelial Cells

Julie M Sheridan, Ashleigh Keown, Antonia Policheni, Siti NA Roesley, Noa Rivlin, Noam Kadouri, Matthew E Ritchie, Reema Jain, Jakub Abramson, Tracy SP Heng, Daniel HD Gray

Journal article  |  2017  |  Cell Reports

Combining multiple tools outperforms individual methods in gene set enrichment analyses

Monther Alhamdoosh, Milica Ng, Nicholas J Wilson, Julie M Sheridan, Huy Huynh, Michael J Wilson, Matthew E Ritchie

Journal article  |  2017  |  Bioinformatics

Easy and efficient ensemble gene set testing with EGSEA.

Monther Alhamdoosh, Charity W Law, Luyi Tian, Julie M Sheridan, Milica Ng, Matthew E Ritchie

Journal article  |  2017  |  F1000Research

Gene set enrichment analysis is a popular approach for prioritising the biological processes perturbed in genomic datasets. The Bi..

Linear ubiquitin chain assembly complex coordinates late thymic T-cell differentiation and regulatory T-cell homeostasis

Charis E Teh, Najoua Lalaoui, Reema Jain, Antonia N Policheni, Melanie Heinlein, Silvia Alvarez-Diaz, Julie M Sheridan, Eva Rieser, Stefanie Deuser, Maurice Darding, Hui-Fern Koay, Yifang Hu, Fiona Kupresanin, Lorraine A O'Reilly, Dale I Godfrey, Gordon K Smyth, Philippe Bouillet, Andreas Strasser, Henning Walczak, John Silke, et al.

Journal article  |  2016  |  Nature Communications

Setdb1-mediated H3K9 methylation is enriched on the inactive X and plays a role in its epigenetic silencing

Andrew Keniry, Linden J Gearing, Natasha Jansz, Joy Liu, Aliaksei Z Holik, Peter F Hickey, Sarah A Kinkel, Darcy L Moore, Kelsey Breslin, Kelan Chen, Ruijie Liu, Catherine Phillips, Miha Pakusch, Christine Biben, Julie M Sheridan, Benjamin T Kile, Catherine Carmichael, Matthew E Ritchie, Douglas J Hilton, Marnie E Blewitt

Journal article  |  2016  |  Epigenetics & Chromatin

Reinforcing the 'gauntlet' of thymic negative selection via exosomal transfer of self-antigens

Julie Sheridan, Daniel Gray

Journal article  |  2015  |  Immunology and Cell Biology

Integration of microRNA signatures of distinct mammary epithelial cell types with their gene expression and epigenetic portraits

Bhupinder Pal, Yunshun Chen, Andrew Bert, Yifang Hu, Julie M Sheridan, Tamara Beck, Wei Shi, Keith Satterley, Paul Jamieson, Gregory J Goodall, Geoffrey J Lindeman, Gordon K Smyth, Jane E Visvader

Journal article  |  2015  |  Breast Cancer Research

A pooled shRNA screen for regulators of primary mammary stem and progenitor cells identifies roles for Asap1 and Prox1

Julie M Sheridan, Matthew E Ritchie, Sarah A Best, Kun Jiang, Tamara J Beck, Francois Vaillant, Kevin Liu, Ross A Dickins, Gordon K Smyth, Geoffrey J Lindeman, Jane E Visvader

Journal article  |  2015  |  BMC Cancer

Scribble Modulates the MAPK/Fra1 Pathway to Disrupt Luminal and Ductal Integrity and Suppress Tumour Formation in the Mammary Gland

Nathan J Godde, Julie M Sheridan, Lorey K Smith, Helen B Pearson, Kara L Britt, Ryan C Galea, Laura L Yates, Jane E Visvader, Patrick O Humbert

Journal article  |  2014  |  PLoS Genetics

edgeR: a versatile tool for the analysis of shRNA-seq and CRISPR-Cas9 genetic screens.

Zhiyin Dai, Julie M Sheridan, Linden J Gearing, Darcy L Moore, Shian Su, Sam Wormald, Stephen Wilcox, Liam O'Connor, Ross A Dickins, Marnie E Blewitt, Matthew E Ritchie

Journal article  |  2014  |  F1000Research

Pooled library sequencing screens that perturb gene function in a high-throughput manner are becoming increasingly popular in func..

Generation of tissue organoids by compaction reaggregation.

Julie M Sheridan, C Clare Blackburn

Journal article  |  2014  |  Methods in Molecular Biology

Cellular reaggregation methods are commonly used to generate tissue organoids for use in biological studies. Using a modified meth..

Global Changes in the Mammary Epigenome Are Induced by Hormonal Cues and Coordinated by Ezh2

Bhupinder Pal, Toula Bouras, Wei Shi, Francois Vaillant, Julie M Sheridan, Naiyang Fu, Kelsey Breslin, Kun Jiang, Matthew E Ritchie, Matthew Young, Geoffrey J Lindeman, Gordon K Smyth, Jane E Visvader

Journal article  |  2013  |  Cell Reports

Isolation of Mouse Mammary Epithelial Subpopulations: A Comparison of Leading Methods

Matthew J Smalley, Howard Kendrick, Julie M Sheridan, Joseph L Regan, Michael D Prater, Geoffrey J Lindeman, Christine J Watson, Jane E Visvader, John Stingl

Journal article  |  2012  |  Journal of Mammary Gland Biology and Neoplasia

Foxn1 regulates lineage progression in cortical and medullary thymic epithelial cells but is dispensable for medullary sublineage divergence.

Craig S Nowell, Nicholas Bredenkamp, Stéphanie Tetélin, Xin Jin, Christin Tischner, Harsh Vaidya, Julie M Sheridan, Frances Hogg Stenhouse, Raphaela Heussen, Andrew JH Smith, C Clare Blackburn

Journal article  |  2011  |  PLoS Genetics

The forkhead transcription factor Foxn1 is indispensable for thymus development, but the mechanisms by which it mediates thymic ep..

Control of mammary stem cell function by steroid hormone signalling

Marie-Liesse Asselin-Labat, Francois Vaillant, Julie M Sheridan, Bhupinder Pal, Di Wu, Evan R Simpson, Hisataka Yasuda, Gordon K Smyth, T John Martin, Geoffrey J Lindeman, Jane E Visvader

Journal article  |  2010  |  Nature

A Novel Method for the Generation of Reaggregated Organotypic Cultures That Permits Juxtaposition of Defined Cell Populations

Julie M Sheridan, Samir Taoudi, Alexander Medvinsky, C Clare Blackburn

Journal article  |  2009  |  genesis

Extensive hematopoietic stem cell generation in the AGM region via maturation of VE-cadherin( )CD45( ) pre-definitive HSCs

Samir Taoudi, Christele Gonneau, Kate Moore, Julie M Sheridan, C Clare Blackburn, Erin Taylor, Alexander Medvinsky

Journal article  |  2008  |  Cell Stem Cell

Contribution of neural crest-derived cells in the embryonic and adult thymus.

Katie Foster, Julie Sheridan, Henrique Veiga-Fernandes, Kathleen Roderick, Vassilis Pachnis, Ralf Adams, Clare Blackburn, Dimitris Kioussis, Mark Coles

Journal article  |  2008  |  The Journal of Immunology

Neural crest (NC)-derived mesenchyme has previously been shown to play an important role in the development of fetal thymus. Using..

EVA regulates thymic stromal organisation and early thymocyte development.

Lucia DeMonte, Simona Porcellini, Elisiana Tafi, Julie Sheridan, Julie Gordon, Marianne Depreter, Natalie Blair, Maddalena Panigada, Francesca Sanvito, Barbara Merati, Anita Albientz, Thomas Barthlott, Laurence Ozmen, C Clare Blackburn, Maria Guttinger

Journal article  |  2007  |  Biochemical and Biophysical Research Communications

Epithelial V-like antigen (EVA) is an immunoglobulin-like adhesion molecule identified in a screen for molecules developmentally r..

Functional evidence for a single endodermal origin for the thymic epithelium.

Julie Gordon, Valerie A Wilson, Natalie F Blair, Julie Sheridan, Alison Farley, Linda Wilson, Nancy R Manley, C Clare Blackburn

Journal article  |  2004  |  Nature Immunology

T cell development depends critically on several distinct thymic epithelial cell types that are organized into two main compartmen..