Claire Gorrie

Genomic interrogation of the burden and transmission of multidrug-resistant pathogens within and across hospital networks

Norelle Sherry, Robyn Lee, Claire Gorrie, Jason Kwong, Rhonda Stuart, Tony Korman, Caroline Marshall, Charlie Higgs, Hiu Tat Chan, Maryza Graham, Paul DR Johnson, Marcel Leroi, Caroline Reed, Michael Richards, Monica Slavin, Leon Worth, Benjamin Howden, Lindsay Grayson, undefined on behalf of the Controlling Superbugs Study Group

Journal article  |  2019

Abstract Background Multidrug-resistant organisms (MDROs) disproportionately affect hospitalized patients due to the combination o..

Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era

Deborah A Williamson, Eric PF Chow, Claire L Gorrie, Torsten Seemann, Danielle J Ingle, Nasra Higgins, Marion Easton, George Taiaroa, Yonatan H Grad, Jason C Kwong, Christopher K Fairley, Marcus Y Chen, Benjamin P Howden

Journal article  |  2019  |  Nature Communications

Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016

Norelle L Sherry, Courtney R Lane, Jason C Kwong, Mark Schultz, Michelle Sait, Kerrie Stevens, Susan Ballard, Anders Goncalves da Silva, Torsten Seemann, Claire L Gorrie, Timothy P Stinear, Deborah A Williamson, Judith Brett, Annaliese van Diemen, Marion Easton, Benjamin P Howden

Journal article  |  2019  |  Journal of Clinical Microbiology

Background Carbapenemase-producing Enterobacterales (CPE) are being increasingly reported in Australia, and i..

Genomics of vancomycin-resistant Enterococcus faecium

Claire Gorrie, Charlie Higgs, Glen Carter, Timothy P Stinear, Benjamin Howden

Journal article  |  2019  |  Microbial Genomics

Vancomycin-resistant Enterococcus faecium (VREfm) is a globally significant public health threat and was listed on the World Healt..

Vancomycin-resistant Enterococcus (VRE) outbreak in a neonatal intensive care unit and special care nursery at a tertiary-care hospital in AustraliaA retrospective case-control study

Patiyan Andersson, Wendy Beckingham, Claire Louise Gorrie, Karina Kennedy, Kathryn Daveson, Susan Alicia Ballard, Ming Chen, Katrina Roper, Nicholas Coatsworth

Journal article  |  2019  |  Infection Control & Hospital Epidemiology

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae

Kelly L Wyres, Ryan R Wick, Louise M Judd, Roni Froumine, Alex Tokolyi, Claire L Gorrie, Margaret MC Lam, Sebastian Duchene, Adam Jenney, Kathryn E Holt

Journal article  |  2019  |  PLOS Genetics

Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations

Margaret MC Lam, Ryan R Wick, Kelly L Wyres, Claire L Gorrie, Louise M Judd, Adam WJ Jenney, Sylvain Brisse, Kathryn E Holt

Journal article  |  2018  |  Microbial Genomics

Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital

Claire L Gorrie, Mirjana Mirceta, Ryan R Wick, Louise M Judd, Kelly L Wyres, Nicholas R Thomson, Richard A Strugnell, Nigel F Pratt, Jill S Garlick, Kerrie M Watson, Peter C Hunter, Steve A McGloughlin, Denis W Spelman, Adam WJ Jenney, Kathryn E Holt

Journal article  |  2018  |  Clinical Infectious Diseases

Antimicrobial resistant Klebsiella pneumoniae carriage and infection in specialized geriatric care wards linked to acquisition in the referring hospital

Claire Gorrie, Mirjana Mirceta, Ryan Wick, Louise Judd, Kelly Wyres, Nicholas Thomson, Richard Strugnell, Nigel Pratt, Jill Garlick, Kerrie Watson, Peter Hunter, Steve McGloughlin, Denis Spelman, Adam Jenney, Kathryn Holt

Journal article  |  2017

Abstract Background Klebsiella pneumoniae is a leading cause of extended-spectrum beta-lactamase (ESBL) producing hospital-associa..

Completing bacterial genome assemblies with multiplex MinION sequencing

Ryan R Wick, Louise M Judd, Claire L Gorrie, Kathryn E Holt

Journal article  |  2017  |  Microbial Genomics

Gastrointestinal Carriage Is a Major Reservoir of Klebsiella pneumoniae Infection in Intensive Care Patients

Claire L Gorrie, Mirjana Mirceta, Ryan R Wick, David J Edwards, Nicholas R Thomson, Richard A Strugnell, Nigel F Pratt, Jill S Garlick, Kerri M Watson, David V Pilcher, Steve A McGloughlin, Denis W Spelman, Adam WJ Jenney, Kathryn E Holt

Journal article  |  2017  |  Clinical Infectious Diseases

Completing bacterial genome assemblies with multiplex MinION sequencing

Ryan Wick, Louise Judd, Claire Gorrie, Kathryn Holt

Journal article  |  2017

Abstract Illumina sequencing platforms have enabled widespread bacterial whole genome sequencing. While Illumina data is appropria..

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R Wick, Louise M Judd, Claire L Gorrie, Kathryn E Holt

Journal article  |  2017  |  PLOS Computational Biology

Unicycler: resolving bacterial genome assemblies from short and long sequencing reads

Ryan Wick, Louise Judd, Claire Gorrie, Kathryn Holt

Journal article  |  2016

1. Abstract The Illumina DNA sequencing platform generates accurate but short reads, which can be used to produce accurate but fra..

Identification of Klebsiella capsule synthesis loci from whole genome data

Kelly L Wyres, Ryan R Wick, Claire Gorrie, Adam Jenney, Rainer Follador, Nicholas R Thomson, Kathryn E Holt

Journal article  |  2016  |  Microbial Genomics

Differential host susceptibility and bacterial virulence factors driving Klebsiella liver abscess in an ethnically diverse population

I Russel Lee, James S Molton, Kelly L Wyres, Claire Gorrie, Jocelyn Wong, Chu Han Hoh, Jeanette Teo, Shirin Kalimuddin, David C Lye, Sophia Archuleta, Kathryn E Holt, Yunn-Hwen Gan

Journal article  |  2016  |  Scientific Reports

Draft Genome Sequence of a Clinical Isolate of Serratia marcescens, Strain AH0650_Sm1

Yu Wan, Claire L Gorrie, Adam Jenney, Mirjana Mirceta, Kathryn E Holt

Journal article  |  2015  |  Genome Announcements

Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health

Kathryn E Holt, Heiman Wertheim, Ruth N Zadoks, Stephen Baker, Chris A Whitehouse, David Dance, Adam Jenney, Thomas R Connor, Li Yang Hsu, Juliette Severin, Sylvain Brisse, Hanwei Cao, Jonathan Wilksch, Claire Gorrie, Mark B Schultz, David J Edwards, Van Nguyen Kinh, Vu Nguyen Trung, Tuyet Dao Trinh, Martijn Mensinke, et al.

Journal article  |  2015  |  Proceedings of the National Academy of Sciences

Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258

Kelly L Wyres, Claire Gorrie, David J Edwards, Heiman FL Wertheim, Li Yang Hsu, Van Kinh Nguyen, Ruth Zadoks, Stephen Baker, Kathryn E Holt

Journal article  |  2015  |  Genome biology and evolution