Jim He

Large-scale patterns of soil antibiotic resistome in Chinese croplands.

Shuai Du, Ju-Pei Shen, Hang-Wei Hu, Jun-Tao Wang, Li-Li Han, Rong Sheng, Wen-Xue Wei, Yun-Ting Fang, Yong-Guan Zhu, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2020  |  Science of The Total Environment

Soil is a vital reservoir of antibiotic resistance genes (ARGs), but we still know little about their distribution in cropland soi..

Fertilizer nitrogen use efficiency and fates in maize cropping systems across China: Field 15N tracer studies

Z Quan, S Li, X Zhang, F Zhu, P Li, R Sheng, X Chen, LM Zhang, JZ He, W Wei, Y Fang

Journal article  |  2020  |  Soil and Tillage Research

Climatic factors have unexpectedly strong impacts on soil bacterial β-diversity in 12 forest ecosystems

Y Zheng, NN Ji, BW Wu, JT Wang, HW Hu, LD Guo, JZ He

Journal article  |  2020  |  Soil Biology and Biochemistry

Rare microbial taxa as the major drivers of ecosystem multifunctionality in long-term fertilized soils

QL Chen, J Ding, D Zhu, HW Hu, M Delgado-Baquerizo, YB Ma, JZ He, YG Zhu

Journal article  |  2020  |  Soil Biology and Biochemistry

© 2019 Soil microbial communities play an essential role in driving multiple functions (i.e., multifunctionality) that are central..

Multiple elements of soil biodiversity drive ecosystem functions across biomes.

Manuel Delgado-Baquerizo, Peter B Reich, Chanda Trivedi, David J Eldridge, Sebastián Abades, Fernando D Alfaro, Felipe Bastida, Asmeret A Berhe, Nick A Cutler, Antonio Gallardo, Laura García-Velázquez, Stephen C Hart, Patrick E Hayes, Ji-Zheng He, Zeng-Yei Hseu, Hang-Wei Hu, Martin Kirchmair, Sigrid Neuhauser, Cecilia A Pérez, Sasha C Reed, et al.

Journal article  |  2020  |  Nature Ecology & Evolution

The role of soil biodiversity in regulating multiple ecosystem functions is poorly understood, limiting our ability to predict how..

Limited effects of depth (0-80 cm) on communities of archaea, bacteria and fungi in paddy soil profiles

Chao-Lei Yuan, Li-Mei Zhang, Jun-Tao Wang, Wen-Kai Teng, Hang-Wei Hu, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2020  |  European Journal of Soil Science

Responses of ureolytic and nitrifying microbes to urease and nitrification inhibitors in selected agricultural soils in Victoria, Australia

AO Luchibia, H Suter, HW Hu, SK Lam, JZ He

Journal article  |  2020  |  Journal of Soils and Sediments

Characterization of the copper resistance mechanism and bioremediation potential of an Acinetobacter calcoaceticus strain isolated from copper mine sludge.

Wei Kang, Jin Zheng, Jianguo Bao, Zhen Wang, Yong Zheng, Ji-Zheng He, Hang-Wei Hu

Journal article  |  2019  |  Environmental Science and Pollution Research

Bioremediation is one of the most effective ways for removal of heavy metals and restoration of contaminated sites. This study inv..

Corrigendum: Fabrication of Photocontrolled Surfaces for Oil/Water Separation through Sulfur(VI) Fluoride Exchange.

H Zhu, D Chen, N Li, Q Xu, H Li, J He, H Wang, P Wu, J Lu

Journal article  |  2019  |  Chemistry – A European Journal

Arsenic and cadmium as predominant factors shaping the distribution patterns of antibiotic resistance genes in polluted paddy soils.

Xiang Zhao, Ju-Pei Shen, Li-Mei Zhang, Shuai Du, Hang-Wei Hu, Ji-Zheng He

Journal article  |  2019  |  Journal of Hazardous Materials

Heavy metals have been recognized as potential factors driving the evolution and development of antibiotic resistance. However, th..

Host identity determines plant associated resistomes

Qing-Lin Chen, Hang-Wei Hu, Dong Zhu, Jing Ding, Zhen-Zhen Yan, Ji-Zheng He, Yong-Guan Zhu

Journal article  |  2019  |  Environmental Pollution

Plant microbiome, as the second genome of plant, and the interface between human and environmental microbiome, represents a potent..

Microbial regulation of natural antibiotic resistance: Understanding the protist-bacteria interactions for evolution of soil resistome

Bao-Anh Thi Nguyen, Qing-Lin Chen, Ji-Zheng He, Hang-Wei Hu

Journal article  |  2019  |  Science of The Total Environment

The emergence, evolution and spread of antibiotic resistance genes (ARGs) in the environment represent a global threat to human he..

Manure application did not enrich antibiotic resistance genes in root endophytic bacterial microbiota of cherry radish.

Yu-Jing Zhang, Hang-Wei Hu, Qing-Lin Chen, Hui Yan, Jun-Tao Wang, Deli Chen, Ji-Zheng He

Journal article  |  2019  |  Applied and Environmental Microbiology

Growing evidence suggests that livestock manure used as organic fertilizer in agriculture may lead to potential propagation of ant..

Effects of repeated applications of urea with DMPP on ammonia oxidizers, denitrifiers, and non-targeted microbial communities of an agricultural soil in Queensland, Australia

AO Luchibia, SK Lam, H Suter, Q Chen, B O'Mara, JZ He

Journal article  |  2019  |  Applied Soil Ecology

© 2019 Elsevier B.V. Nitrification inhibitors have been reported to reduce nitrous oxide emission and nitrate leaching in agricult..

Comammox Nitrospira play an active role in nitrification of agricultural soils amended with nitrogen fertilizers

Chaoyu Li, Hang-Wei Hu, Qing-Lin Chen, Deli Chen, Ji-Zheng He

Journal article  |  2019  |  Soil Biology and Biochemistry

Antibiotic resistance in urban green spaces mirrors the pattern of industrial distribution

Zhen-Zhen Yan, Qing-Lin Chen, Yu-Jing Zhang, Ji-Zheng He, Hang-Wei Hu

Journal article  |  2019  |  Environment International

Urban green spaces are closely related to the activities and health of urban residents. Turf grass and soil are two major interfac..

Transfer of antibiotic resistance from manure-amended soils to vegetable microbiomes

Yu-Jing Zhang, Hang-Wei Hu, Qing-Lin Chen, Brajesh K Singh, Hui Yan, Deli Chen, Ji-Zheng He

Journal article  |  2019  |  Environment International

The increasing antimicrobial resistance in manure-amended soil can potentially enter food chain, representing an important vehicle..

Impact of microwave disinfestation treatments on the bacterial communities of no-till agricultural soils

Muhammad J Khan, Stephanie D Jurburg, Jizheng He, Graham Brodie, Dorin Gupta

Journal article  |  2019  |  European Journal of Soil Science

Multiple factors drive the abundance and diversity of the diazotrophic community in typical farmland soils of China

Li-Li Han, Qing Wang, Ju-Pei Shen, Hong J Di, Jun-Tao Wang, Wen-Xue Wei, Yun-Ting Fang, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2019  |  FEMS Microbiology Ecology

Biological nitrogen fixation plays an important role in nitrogen cycling by transferring atmospheric N2 to plant-available N in th..

Distribution and Succession Feature of Antibiotic Resistance Genes Along a Soil Development Chronosequence in Urumqi No. 1 Glacier of China

Ju-Pei Shen, Zong-Ming Li, Hang-Wei Hu, Jun Zeng, Li-Mei Zhang, Shuai Du, Ji-Zheng He

Journal article  |  2019  |  Frontiers in Microbiology

Adaptive responses of comammox Nitrospira and canonical ammonia oxidizers to long-term fertilizations: Implications for the relative contributions of different ammonia oxidizers to soil nitrogen cycling

Jichen Wang, Jianlei Wang, Geoff Rhodes, Ji-Zheng He, Yuan Ge

Journal article  |  2019  |  Science of The Total Environment

Salinity as a predominant factor modulating the distribution patterns of antibiotic resistance genes in ocean and river beach soils

Yu-Jing Zhang, Hang-Wei Hu, Hui Yan, Jun-Tao Wang, Shu Kee Lam, Qing-Lin Chen, Deli Chen, Ji-Zheng He

Journal article  |  2019  |  Science of The Total Environment

Growing evidence points to the pivotal role of the environmental factors in influencing the transmission of antibiotic resistance ..

Effect of treated farm dairy effluents, with or without animal urine, on nitrous oxide emissions, ammonia oxidisers and denitrifiers in the soil

Siyu Chen, Hong Jie Di, Keith C Cameron, Andriy Podolyan, Jupei Shen, Jizheng He

Journal article  |  2019  |  Journal of Soils and Sediments

Sorption mechanism and distribution of cadmium by different microbial species

Jie Li, Yu-Rong Liu, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2019  |  Journal of Environmental Management

Plant evenness modulates the effect of plant richness on soil bacterial diversity

Yao-Qin Sun, Jiang Wang, Congcong Shen, Ji-Zheng He, Yuan Ge

Journal article  |  2019  |  Science of The Total Environment

Dissimilatory nitrate reduction to ammonium dominates nitrate reduction in long-term low nitrogen fertilized rice paddies

Arjun Pandey, Helen Suter, Ji-Zheng He, Hang-Wei Hu, Deli Chen

Journal article  |  2019  |  Soil Biology and Biochemistry

Protist communities are more sensitive to nitrogen fertilization than other microorganisms in diverse agricultural soils

Zhi-Bo Zhao, Ji-Zheng He, Stefan Geisen, Li-Li Han, Jun-Tao Wang, Ju-Pei Shen, Wen-Xue Wei, Yun-Ting Fang, Pei-Pei Li, Li-Mei Zhang

Journal article  |  2019  |  Microbiome

Rare earth oxide nanoparticles promote soil microbial antibiotic resistance by selectively enriching antibiotic resistance genes

Lin Qi, Yuan Ge, Tian Xia, Ji-Zheng He, Congcong Shen, Jianlei Wang, Yong-Jun Liu

Journal article  |  2019  |  Environmental Science: Nano

Distributions and environmental drivers of archaea and bacteria in paddy soils

Chao-Lei Yuan, Li-Mei Zhang, Jun-Tao Wang, Hang-Wei Hu, Ju-Pei Shen, Peng Cao, Ji-Zheng He

Journal article  |  2019  |  Journal of Soils and Sediments

WATER INFILTRATION OF COVERING SOILS WITH DIFFERENT TEXTURES AND BULK DENSITIES IN GRAVEL MULCHED AREAS

QG Dong, JC Han, Y Zhang, N Li, N Lei, ZH Sun, YC Du, J He

Journal article  |  2019  |  Applied Ecology and Environmental Research

Viral metagenomics analysis and eight novel viral genomes identified from the Dushanzi mud volcanic soil in Xinjiang, China

Dan-Ting Yu, Ji-Zheng He, Li-Mei Zhang, Li-Li Han

Journal article  |  2019  |  Journal of Soils and Sediments

Ectomycorrhizal fungi inoculation alleviates simulated acid rain effects on soil ammonia oxidizers and denitrifiers in Masson pine forest

Yan Li, Zhan Chen, Ji-Zheng He, Qing Wang, Congcong Shen, Yuan Ge

Journal article  |  2019  |  Environmental Microbiology

MICROWAVE SOIL TREATMENT INCREASES SOIL NITROGEN SUPPLY FOR SUSTAINED WHEAT PRODUCTIVITY

MJ Khan, G Brodie, D Gupta, J He

Journal article  |  2019  |  Transactions of the ASABE

DNA stable isotope probing revealed no incorporation of 13CO2 into comammox Nitrospira but ammonia-oxidizing archaea in a subtropical acid soil

ZY He, JP Shen, LM Zhang, HJ Tian, B Han, HJ Di, JZ He

Journal article  |  2019  |  Journal of Soils and Sediments

Growth of comammox Nitrospira is inhibited by nitrification inhibitors in agricultural soils

C Li, HW Hu, QL Chen, D Chen, JZ He

Journal article  |  2019  |  Journal of Soils and Sediments

[Effects of Stimulated Nitrogen Deposition on the Bacterial Community Structure of Semiarid Temperate Grassland].

Zong-Ming Li, Ju-Pei Shen, Li-Mei Zhang, Guo-Ping Liu, Wen-Ming Bai, Ji-Zheng He

Journal article  |  2018  |  Huanjing Kexue/Environmental Science

With the development of economics, the deposition of available nitrogen in the terrestrial ecosystem is increasing dramatically du..

Unraveling Microbial Communities Associated with Methylmercury Production in Paddy Soils

Yu-Rong Liu, Alexander Johs, Li Bi, Xia Lu, Hang-Wei Hu, Dan Sun, Ji-Zheng He, Baohua Gu

Journal article  |  2018  |  Environmental Science & Technology

Differentiated Mechanisms of Biochar Mitigating Straw-Induced Greenhouse Gas Emissions in Two Contrasting Paddy Soils

Ya-Qi Wang, Ren Bai, Hong J Di, Liu-Ping Mo, Bing Han, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2018  |  Frontiers in Microbiology

Niche separation of comammox Nitrospira and canonical ammonia oxidizers in an acidic subtropical forest soil under long-term nitrogen deposition

Xiuzhen Shi, Hang-Wei Hu, Jianqing Wang, Ji-Zheng He, Chengyang Zheng, Xiaohua Wan, Zhiqun Huang

Journal article  |  2018  |  Soil Biology and Biochemistry

Consistent responses of soil microbial taxonomic and functional attributes to mercury pollution across China

Yu-Rong Liu, Manuel Delgado-Baquerizo, Li Bi, Jun Zhu, Ji-Zheng He

Journal article  |  2018  |  Microbiome

Short-term copper exposure as a selection pressure for antibiotic resistance and metal resistance in an agricultural soil

Wei Kang, Yu-Jing Zhang, Xiuzhen Shi, Ji-Zheng He, Hang-Wei Hu

Journal article  |  2018  |  Environmental Science and Pollution Research

Impacts of long-term nitrogen addition, watering and mowing on ammonia oxidizers, denitrifiers and plant communities in a temperate steppe

Cui-Jing Zhang, Zhong-Ling Yang, Ju-Pei Shen, Yi-Fei Sun, Jun-Tao Wang, Hong-Yan Han, Shi-Qiang Wan, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2018  |  Applied Soil Ecology

Diversity of herbaceous plants and bacterial communities regulates soil resistome across forest biomes

Hang-Wei Hu, Jun-Tao Wang, Brajesh K Singh, Yu-Rong Liu, Yong-Liang Chen, Yu-Jing Zhang, Ji-Zheng He

Journal article  |  2018  |  Environmental Microbiology

Nitrogen Addition Decreases Dissimilatory Nitrate Reduction to Ammonium in Rice Paddies

Arjun Pandey, Helen Suter, Ji-Zheng He, Hang-Wei Hu, Deli Chen

Journal article  |  2018  |  Applied and Environmental Microbiology

Impacts of Projected Climate Warming and Wetting on Soil Microbial Communities in Alpine Grassland Ecosystems of the Tibetan Plateau

Jun Zeng, Ju-Pei Shen, Jun-Tao Wang, Hang-Wei Hu, Cui-Jing Zhang, Ren Bai, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2018  |  Microbial Ecology

The biogeography of fungal communities in paddy soils is mainly driven by geographic distance

Chaolei Yuan, Limei Zhang, Hangwei Hu, Juntao Wang, Jupei Shen, Jizheng He

Journal article  |  2018  |  Journal of Soils and Sediments

Responses of soil ammonia oxidizers and denitrifiers to different grazing intensities

Y Sun, J Shen, C Zhang, G Han, M Hong, B Zhao, J He

Journal article  |  2018  |  Acta Ecologica Sinica

Intraspecies variation in a widely distributed tree species regulates the responses of soil microbiome to different temperature regimes

Cui-Jing Zhang, Manuel Delgado-Baquerizo, John E Drake, Peter B Reich, Mark G Tjoelker, David T Tissue, Jun-Tao Wang, Ji-Zheng He, Brajesh K Singh

Journal article  |  2018  |  Environmental Microbiology Reports

Fates of N-15-labeled fertilizer in a black soil-maize system and the response to straw incorporation in Northeast China

Zhi Quan, Shanlong Li, Feifei Zhu, Limei Zhang, Jizheng He, Wenxue Wei, Yunting Fang

Journal article  |  2018  |  Journal of Soils and Sediments

New insights into the role of microbial community composition in driving soil respiration rates

Yu-Rong Liu, Manuel Delgado-Baquerizo, Jun-Tao Wang, Hang-Wei Hu, Ziming Yang, Ji-Zheng He

Journal article  |  2018  |  Soil Biology and Biochemistry

Manipulating the soil microbiome for improved nitrogen management

Hang-Wei Hu, Ji-Zheng He

Journal article  |  2018  |  Microbiology Australia

Responses of soil microbial community to nitrogen fertilizer and precipitation regimes in a semi-arid steppe

Yi-Fei Sun, Ju-Pei Shen, Cui-Jing Zhang, Li-Mei Zhang, Wen-Ming Bai, Ying Fang, Ji-Zheng He

Journal article  |  2018  |  Journal of Soils and Sediments

Diversity and Distribution Characteristics of Viruses in Soils of a Marine-Terrestrial Ecotone in East China

Dan-Ting Yu, Li-Li Han, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2018  |  Microbial Ecology

Aerobic composting reduces antibiotic resistance genes in cattle manure and the resistome dissemination in agricultural soils

Min Gou, Hang-Wei Hu, Yu-Jing Zhang, Jun-Tao Wang, Helen Hayden, Yue-Qin Tang, Ji-Zheng He

Journal article  |  2018  |  Science of The Total Environment

Understanding the mechanisms for the lower nitrous oxide emissions from fodder beet urine compared with kale urine from dairy cows

Bin Yao, Hong Jie Di, Keith C Cameron, Andriy Podolyan, Jupei Shen, Jizheng He

Journal article  |  2018  |  Journal of Soils and Sediments

Temporal succession of soil antibiotic resistance genes following application of swine, cattle and poultry manures spiked with or without antibiotics

Yu-Jing Zhang, Hang-Wei Hu, Min Gou, Jun-Tao Wang, Deli Chen, Ji-Zheng He

Journal article  |  2017  |  Environmental Pollution

Nitrifier-induced denitrification is an important source of soil nitrous oxide and can be inhibited by a nitrification inhibitor 3,4-dimethylpyrazole phosphate

Xiuzhen Shi, Hang-Wei Hu, Xia Zhu-Barker, Helen Hayden, Juntao Wang, Helen Suter, Deli Chen, Ji-Zheng He

Journal article  |  2017  |  Environmental Microbiology

Microbial nitrous oxide emissions in dryland ecosystems: mechanisms, microbiome and mitigation

Hang-Wei Hu, Pankaj Trivedi, Ji-Zheng He, Brajesh K Singh

Journal article  |  2017  |  Environmental Microbiology

Comammox-a newly discovered nitrification process in the terrestrial nitrogen cycle

Hang-Wei Hu, Ji-Zheng He

Journal article  |  2017  |  Journal of Soils and Sediments

Fungal networks serve as novel ecological routes for enrichment and dissemination of antibiotic resistance genes as exhibited by microcosm experiments

Rashid Nazir, Ju-Pei Shen, Jun-Tao Wang, Hang-Wei Hu, Ji-Zheng He

Journal article  |  2017  |  Scientific Reports

Copper Pollution Increases the Resistance of Soil Archaeal Community to Changes in Water Regime

Jing Li, Yu-Rong Liu, Li-Juan Cui, Hang-Wei Hu, Jun-Tao Wang, Ji-Zheng He

Journal article  |  2017  |  Microbial Ecology

Effects of the nitrification inhibitor acetylene on nitrous oxide emissions and ammonia-oxidizing microorganisms of different agricultural soils under laboratory incubation conditions

Rui Liu, Helen L Hayden, Hangwei Hu, Jizheng He, Helen Suter, Deli Chen

Journal article  |  2017  |  Applied Soil Ecology

[Research advance on molecular ecology of asymbiotic nitrogen fixation microbes.]

Peng Xia Xu, Li Li Han, Ji Zheng He, Feng Luo, Li Mei Zhang

Journal article  |  2017  |  Chinese Journal of Applied Ecology

Nitrogen is the main limiting factor in the productivity of ecological system, and biological nitrogen fixation is the main nitrog..

Harnessing microbiome-based biotechnologies for sustainable mitigation of nitrous oxide emissions

Hang-Wei Hu, Ji-Zheng He, Brajesh K Singh

Journal article  |  2017  |  Microbial Biotechnology

Time-dependent shifts in populations and activity of bacterial and archaeal ammonia oxidizers in response to liming in acidic soils

Miao-Miao Zhang, Ricardo JE Alves, Dan-Dan Zhang, Li-Li Han, Ji-Zheng He, Li-Mei Zhang

Journal article  |  2017  |  Soil Biology and Biochemistry

Palaeoclimate explains a unique proportion of the global variation in soil bacterial communities

Manuel Delgado-Baquerizo, Andrew Bissett, David J Eldridge, Fernando T Maestre, Ji-Zheng He, Jun-Tao Wang, Kelly Hamonts, Yu-Rong Liu, Brajesh K Singh, Noah Fierer

Journal article  |  2017  |  Nature Ecology & Evolution

[Responses of Soil Ammonia Oxidizers to Simulated Warming and Increased Precipitation in a Temperate Steppe of Inner Mongolia].

Cui-Jing Zhang, Ju-Pei Shen, Yi-Fei Sun, Jun-Tao Wang, Zhong-Ling Yang, Hong-Yan Han, Li-Mei Zhang, Shi-Qiang Wan, Ji-Zheng He

Journal article  |  2017  |  Huanjing Kexue/Environmental Science

Soil ammonia oxidizers, as key players for the ammonia oxidation process in soil N cycling, could respond, adapt, and give feedbac..

Responses of soil nitrous oxide production and abundances and composition of associated microbial communities to nitrogen and water amendment

Qing Wang, Yu-Rong Liu, Cui-Jing Zhang, Li-Mei Zhang, Li-Li Han, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2017  |  Biology and Fertility of Soils

Residule Effect of Microwave Soil Treatment on Growth and Development of Wheat

M Khan, G Brodie, D Gupta, J He

Conference Proceedings  |  2017

Effects of the nitrification inhibitor dicyandiamide (DCD) on N(2)Oemissions and the abundance of nitrifiers and denitrifiers in two contrasting agricultural soils

Qing Wang, Hang-Wei Hu, Ju-Pei Shen, Shuai Du, Li-Mei Zhang, Ji-Zheng He, Li-Li Han

Journal article  |  2017  |  Journal of Soils and Sediments

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers

Ren Bai, Jun-Tao Wang, Ye Deng, Ji-Zheng He, Kai Feng, Li-Mei Zhang

Journal article  |  2017  |  Frontiers in Microbiology

Contrasting effects of nitrogen forms and soil pH on ammonia oxidizing microorganisms and their responses to long-term nitrogen fertilization in a typical steppe ecosystem

Jiaoyan Ying, Xiaoxiao Li, Nana Wang, Zhichun Lan, Jizheng He, Yongfei Bai

Journal article  |  2017  |  Soil Biology and Biochemistry

Effects of different agricultural wastes on the dissipation of PAHs and the PAH-degrading genes in a PAH-contaminated soil

Xuemei Han, Hangwei Hu, Xiuzhen Shi, Limei Zhang, Jizheng He

Journal article  |  2017  |  Chemosphere

Interactive effects of multiple climate change factors on ammonia oxidizers and denitrifiers in a temperate steppe

Cui-Jing Zhang, Ju-Pei Shen, Yi-Fei Sun, Jun-Tao Wang, Li-Mei Zhang, Zhong-Ling Yang, Hong-Yan Han, Shi-Qiang Wan, Ji-Zheng He

Journal article  |  2017  |  FEMS Microbiology Ecology

Response of ammonia oxidizers and denitrifiers to repeated applications of a nitrification inhibitor and a urease inhibitor in two pasture soils

Xiuzhen Shi, Hang-Wei Hu, Kevin Kelly, Deli Chen, Ji-Zheng He, Helen Suter

Journal article  |  2017  |  Journal of Soils and Sediments

Identity of biocrust species and microbial communities drive the response of soil multifunctionality to simulated global change

Yu-Rong Liu, Manuel Delgado-Baquerizo, Pankaj Trivedi, Ji-Zheng He, Jun-Tao Wang, Brajesh K Singh

Journal article  |  2017  |  Soil Biology and Biochemistry

Genetic and functional diversity of ubiquitous DNA viruses in selected Chinese agricultural soils

Li-Li Han, Dan-Ting Yu, Li-Mei Zhang, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2017  |  Scientific Reports

Unique community structure of viruses in a glacier soil of the Tianshan Mountains, China

Li-Li Han, Dan-Ting Yu, Li-Mei Zhang, Jun-Tao Wang, Ji-Zheng He

Journal article  |  2017  |  Journal of Soils and Sediments

N-15(2) as a tracer of biological N-2 fixation: A 75-year retrospective

Phillip M Chalk, Ji-Zheng He, Mark B Peoples, Deli Chen

Journal article  |  2017  |  Soil Biology and Biochemistry

Contrasting response of two grassland soils to N addition and moisture levels: N2O emission and functional gene abundance

Xi-En Long, Ju-Pei Shen, Jun-Tao Wang, Li-Mei Zhang, Hongjie Di, Ji-Zheng He

Journal article  |  2017  |  Journal of Soils and Sediments

Temporal dynamics of fungal communities in soybean rhizosphere

Li-Li Han, Jun-Tao Wang, Sheng-Hui Yang, Wen-Feng Chen, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2017  |  Journal of Soils and Sediments

Long-Term Nickel Contamination Increases the Occurrence of Antibiotic Resistance Genes in Agricultural Soils

Hang-Wei Hu, Jun-Tao Wang, Jing Li, Xiu-Zhen Shi, Yi-Bing Ma, Deli Chen, Ji-Zheng He

Journal article  |  2017  |  Environmental Science & Technology

Research methods for soil viral ecology

L Han, D Yu, J He

Journal article  |  2017  |  Acta Ecologica Sinica

Comparison of Archaeal Populations in Soil and Their Encapsulated Iron-Manganese Nodules in Four Locations Spanning from North to South China

Gui-You Zhang, Li-Mei Zhang, Ji-Zheng He, Fan Liu

Journal article  |  2017  |  Geomicrobiology Journal

The effect of temperature and moisture on the source of N2O and contributions from ammonia oxidizers in an agricultural soil

Rui Liu, Helen L Hayden, Helen Suter, Hangwei Hu, Shu Kee Lam, Jizheng He, Pauline M Mele, Deli Chen

Journal article  |  2017  |  Biology and Fertility of Soils

Effects of Cellular Sorption on Mercury Bioavailability and Methylmercury Production by Desulfovibrio desulfuricans ND132

Yu-Rong Liu, Xia Lu, Linduo Zhao, Jing An, Ji-Zheng He, Eric M Pierce, Alexander Johs, Baohua Gu

Journal article  |  2016  |  Environmental Science & Technology

Plant community, geographic distance and abiotic factors play different roles in predicting AMF biogeography at the regional scale in northern China

Tianle Xu, Stavros D Veresoglou, Yongliang Chen, Matthias C Rillig, Dan Xiang, Daniel Ondrej, Zhipeng Hao, Lei Liu, Ye Deng, Yajun Hu, Weiping Chen, Juntao Wang, Jizheng He, Baodong Chen

Journal article  |  2016  |  Environmental Microbiology Reports

Effects of dicyandiamide and acetylene on N2O emissions and ammonia oxidizers in a fluvo-aquic soil applied with urea

Qing Wang, Li-Mei Zhang, Ju-Pei Shen, Shuai Du, Li-Li Han, Ji-Zheng He

Journal article  |  2016  |  Environmental Science and Pollution Research

Nitrogen fertiliser-induced changes in N2O emissions are attributed more to ammonia-oxidising bacteria rather than archaea as revealed using 1-octyne and acetylene inhibitors in two arable soils

Qing Wang, Li-Mei Zhang, Ju-Pei Shen, Shuai Du, Li-Li Han, Ji-Zheng He

Journal article  |  2016  |  Biology and Fertility of Soils

Field-based evidence for copper contamination induced changes of antibiotic resistance in agricultural soils

Hang-Wei Hu, Jun-Tao Wang, Jing Li, Jun-Jian Li, Yi-Bing Ma, Deli Chen, Ji-Zheng He

Journal article  |  2016  |  Environmental Microbiology

Longitudinal occurrence of methylmercury in terrestrial ecosystems of the Tibetan Plateau

Yu-Rong Liu, Ji-Xin Dong, Qiang-Gong Zhang, Jun-Tao Wang, Li-Li Han, Jun Zeng, Ji-Zheng He

Journal article  |  2016  |  Environmental Pollution

Effects of 3,4-dimethylpyrazole phosphate (DMPP) on nitrification and the abundance and community composition of soil ammonia oxidizers in three land uses

Xiuzhen Shi, Hangwei Hu, Jizheng He, Deli Chen, Helen Charlotte Suter

Journal article  |  2016  |  Biology and Fertility of Soils

Nitrification Is a Primary Driver of Nitrous Oxide Production in Laboratory Microcosms from Different Land-Use Soils

Rui Liu, Hangwei Hu, Helen Suter, Helen L Hayden, Jizheng He, Pauline Mele, Deli Chen

Journal article  |  2016  |  Frontiers in Microbiology

Effects of the Nitrification Inhibitor 3,4-Dimethylpyrazole Phosphate on Nitrification and Nitrifiers in Two Contrasting Agricultural Soils

Xiuzhen Shi, Hang-Wei Hu, Christoph Mueller, Ji-Zheng He, Deli Chen, Helen Charlotte Suter

Journal article  |  2016  |  Applied and Environmental Microbiology

Sorption of roxarsone onto soils with different physicochemical properties

Qing-Long Fu, Jian-Zhou He, Lee Blaney, Dong-Mei Zhou

Journal article  |  2016  |  Chemosphere

Primary Succession of Nitrogen Cycling Microbial Communities Along the Deglaciated Forelands of Tianshan Mountain, China

Jun Zeng, Kai Lou, Cui-Jing Zhang, Jun-Tao Wang, Hang-Wei Hu, Ju-Pei Shen, Li-Mei Zhang, Li-Li Han, Tao Zhang, Qin Lin, Phillip M Chalk, Ji-Zheng He

Journal article  |  2016  |  Frontiers in Microbiology

Environmental Filtering Process Has More Important Roles than Dispersal Limitation in Shaping Large-Scale Prokaryotic Beta Diversity Patterns of Grassland Soils

Peng Cao, Jun-Tao Wang, Hang-Wei Hu, Yuan-Ming Zheng, Yuan Ge, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2016  |  Microbial Ecology

Species identity of biocrust-forming lichens drives the response of soil nitrogen cycle to altered precipitation frequency and nitrogen amendment

Yu-Rong Liu, Manuel Delgado-Baquerizo, Pankaj Trivedi, Ji-Zheng He, Brajesh K Singh

Journal article  |  2016  |  Soil Biology and Biochemistry

[Global change field manipulative experiments and their applications in soil microbial ecology.]

Cui Jing Zhang, Ji Zheng He, Ju Pei Shen

Journal article  |  2016  |  Chinese Journal of Applied Ecology

In recent decades, global climate change is one of the main concerns around the world. Land use change and the high demand for fos..

Impacts of reclaimed water irrigation on soil antibiotic resistome in urban parks of Victoria, Australia

Xue-Mei Han, Hang-Wei Hu, Xiu-Zhen Shi, Jun-Tao Wang, Li-Li Han, Deli Chen, Ji-Zheng He

Journal article  |  2016  |  Environmental Pollution

Temporal changes of antibiotic-resistance genes and bacterial communities in two contrasting soils treated with cattle manure

Hang-Wei Hu, Xue-Mei Han, Xiu-Zhen Shi, Jun-Tao Wang, Li-Li Han, Deli Chen, Ji-Zheng He

Journal article  |  2016  |  FEMS Microbiology Ecology

Influence of rice straw amendment on mercury methylation and nitrification in paddy soils

Yu-Rong Liu, Ji-Xin Dong, Li-Li Han, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2016  |  Environmental Pollution

Coupling of soil prokaryotic diversity and plant diversity across latitudinal forest ecosystems

Jun-Tao Wang, Yuan-Ming Zheng, Hang-Wei Hu, Jing Li, Li-Mei Zhang, Bao-Dong Chen, Wei-Ping Chen, Ji-Zheng He

Journal article  |  2016  |  Scientific Reports

Effects of a nitrification inhibitor on the metabolic activity of ammonia oxidisers

D Chen, X Shi, H Hu, J He, H Suter

Conference Proceedings  |  2016

Review of the key enzymes in the anammox process and ecological inferences derived from related molecular markers

R Bai, JZ He, JP Shen, X Chen, LM Zhang

Journal article  |  2016  |  Acta Ecologica Sinica

Effects of climate warming and elevated CO2 on autotrophic nitrification and nitrifiers in dryland ecosystems

Hang-Wei Hu, Catriona A Macdonald, Pankaj Trivedi, Ian C Anderson, Yong Zheng, Bronwyn Holmes, Levente Bodrossy, Jun-Tao Wang, Ji-Zheng He, Brajesh K Singh

Journal article  |  2016  |  Soil Biology and Biochemistry

Advances in viral ecology research

LL Han, JZ He

Journal article  |  2016  |  Acta Ecologica Sinica

Copper pollution decreases the resistance of soil microbial community to subsequent dry-rewetting disturbance

Jing Li, Jun-Tao Wang, Hang-Wei Hu, Yi-Bing Ma, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2016  |  Journal of Environmental Sciences

Dissimilatory nitrate reduction to ammonium, denitrification and anaerobic ammonium oxidation in paddy soil

D Chen, A Pandey, H Suter, J He

Conference Proceedings  |  2016

Variability of heavy metal content in soils of typical Tibetan grasslands

Yu-Rong Liu, Zi-Yang He, Zi-Ming Yang, Guo-Xin Sun, Ji-Zheng He

Journal article  |  2016  |  RSC Advances

Activity, abundance and community structure of anammox bacteria along depth profiles in three different paddy soils

Ren Bai, Dan Xi, Ji-Zheng He, Hang-Wei Hu, Yun-Ting Fang, Li-Mei Zhang

Journal article  |  2015  |  Soil Biology and Biochemistry

Candidatus Brocadia and Candidatus Kuenenia predominated in anammox bacterial community in selected Chinese paddy soils (vol 15, 1977, 2015)

Ren Bai, Xin Chen, Ji-Zheng He, Ju-Pei Shen, Li-Mei Zhang

Journal article  |  2015  |  Journal of Soils and Sediments

Influence of temperature and moisture on the relative contributions of heterotrophic and autotrophic nitrification to gross nitrification in an acid cropping soil

Rui Liu, Helen Suter, Jizheng He, Helen Hayden, Deli Chen

Journal article  |  2015  |  Journal of Soils and Sediments

Nitrate production is mainly heterotrophic in an acid dairy soil with high organic content in Australia

Rui Liu, Helen Suter, Helen Hayden, Jizheng He, Deli Chen

Journal article  |  2015  |  Biology and Fertility of Soils

The large-scale distribution of ammonia oxidizers in paddy soils is driven by soil pH, geographic distance, and climatic factors

Hang-Wei Hu, Li-Mei Zhang, Chao-Lei Yuan, Yong Zheng, Jun-Tao Wang, Deli Chen, Ji-Zheng He

Journal article  |  2015  |  Frontiers in Microbiology

Microbial regulation of terrestrial nitrous oxide formation: understanding the biological pathways for prediction of emission rates

Hang-Wei Hu, Deli Chen, Ji-Zheng He

Journal article  |  2015  |  FEMS Microbiology Reviews

Candidatus Brocadia and Candidatus Kuenenia predominated in anammox bacterial community in selected Chinese paddy soils

Ren Bai, Xin Chen, Ji-Zheng He, Ju-Pei Shen, Li-Mei Zhang

Journal article  |  2015  |  Journal of Soils and Sediments

Insight into the Modulation of Dissolved Organic Matter on Microbial Remediation of PAH-Contaminated Soils

Xue-Mei Han, Yu-Rong Liu, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2015  |  Microbial Ecology

Long-term nickel exposure altered the bacterial community composition but not diversity in two contrasting agricultural soils

Jing Li, Hang-Wei Hu, Yi-Bing Ma, Jun-Tao Wang, Yu-Rong Liu, Ji-Zheng He

Journal article  |  2015  |  Environmental Science and Pollution Research

Different influences of field aging on nickel toxicity to Folsomia candida in two types of soil

Yu-Rong Liu, Jing Li, Ji-Zheng He, Yi-Bing Ma, Yuan-Ming Zheng

Journal article  |  2015  |  Environmental Science and Pollution Research

Paenibacillus tibetensis sp nov., a psychrophilic bacterium isolated from alpine swamp meadow soil

Li-Li Han, Ji-Zheng He, Yuan-Ming Zheng, Jun Zeng, Li-Mei Zhang

Journal article  |  2015  |  INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The effect of nitrification inhibitors in reducing nitrification and the ammonia oxidizer population in three contrasting soils

Rui Liu, Helen Hayden, Helen Suter, Jizheng He, Deli Chen

Journal article  |  2015  |  Journal of Soils and Sediments

Soil pH determines the alpha diversity but not beta diversity of soil fungal community along altitude in a typical Tibetan forest ecosystem

Jun-Tao Wang, Yuan-Ming Zheng, Hang-Wei Hu, Li-Mei Zhang, Jing Li, Ji-Zheng He

Journal article  |  2015  |  Journal of Soils and Sediments

Effects of regenerating vegetation on soil enzyme activity and microbial structure in reclaimed soils on a surface coal mine site

Junjian Li, Xiaomei Zhou, Junxia Yan, Hongjian Li, Jizheng He

Journal article  |  2015  |  Applied Soil Ecology

Effects of nitrogen deposition rates and frequencies on the abundance of soil nitrogen-related functional genes in temperate grassland of northern China

Qiushi Ning, Qian Gu, Jupei Shen, Xiaotao Lv, Junjie Yang, Ximei Zhang, Jizheng He, Jianhui Huang, Hong Wang, Zhihong Xu, Xingguo Han

Journal article  |  2015  |  Journal of Soils and Sediments

Field-based evidence for consistent responses of bacterial communities to copper contamination in two contrasting agricultural soils

Jing Li, Yi-Bing Ma, Hang-Wei Hu, Jun-Tao Wang, Yu-Rong Liu, Ji-Zheng He

Journal article  |  2015  |  Frontiers in Microbiology

Water addition regulates the metabolic activity of ammonia oxidizers responding to environmental perturbations in dry subhumid ecosystems

Hang-Wei Hu, Catriona A Macdonald, Pankaj Trivedi, Bronwyn Holmes, Levente Bodrossy, Ji-Zheng He, Brajesh K Singh

Journal article  |  2015  |  Environmental Microbiology

Effects of long-term n fertilizer application and liming on nitrification and ammonia oxidizers in acidic soils

MM Zhang, B Wang, DG Li, JH He, L Zhang

Journal article  |  2015  |  Acta Ecologica Sinica

A preliminary theoretical framework of microbial ecology

P Cao, JZ He

Journal article  |  2015  |  Acta Ecologica Sinica

Mechanisms of community organization and spatiotemporal patterns of soil microbial communities

JZ He, JT Wang

Journal article  |  2015  |  Acta Ecologica Sinica

Altitudinal Distribution Patterns of Soil Bacterial and Archaeal Communities Along Mt. Shegyla on the Tibetan Plateau

Jun-Tao Wang, Peng Cao, Hang-Wei Hu, Jing Li, Li-Li Han, Li-Mei Zhang, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2015  |  Microbial Ecology

Contrasting response of nitrification capacity in three agricultural soils to N addition during short-term incubation

Ju-Pei Shen, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2014  |  Journal of Soils and Sediments

[Response of nitrification/denitrification and their associated microbes to soil moisture change in paddy soil].

Ruo-Xuan Liu, Ji-Zheng He, Li-Mei Zhang

Journal article  |  2014  |  Huanjing Kexue/Environmental Science

To investigate the effect of moisture change on nitrification and denitrification and their corresponding functional microbes, an ..

Patterns of Bacterial Diversity Along a Long-Term Mercury-Contaminated Gradient in the Paddy Soils

Yu-Rong Liu, Jian-Jun Wang, Yuan-Ming Zheng, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2014  |  Microbial Ecology

Response of bacterial pdo1, nah, and C12O genes to aged soil PAH pollution in a coke factory area

Xue-Mei Han, Yu-Rong Liu, Yuan-Ming Zheng, Xiao-Xia Zhang, Ji-Zheng He

Journal article  |  2014  |  Environmental Science and Pollution Research

The effect of soil pH and dicyandiamide (DCD) on N2O emissions and ammonia oxidiser abundance in a stimulated grazed pasture soil

Aimee Robinson, Hong Jie Di, Keith C Cameron, Andriy Podolyan, Jizheng He

Journal article  |  2014  |  Journal of Soils and Sediments

Response of ammonia-oxidizing archaea and bacteria to long-term industrial effluent-polluted soils, Gujarat, Western India

Gangavarapu Subrahmanyam, Ju-Pei Shen, Yu-Rong Liu, Gattupalli Archana, Ji-Zheng He

Journal article  |  2014  |  Environmental Monitoring and Assessment

Frontiers in the microbial processes of ammonia oxidation in soils and sediments

Ju-Pei Shen, Zhihong Xu, Ji-Zheng He

Journal article  |  2014  |  Journal of Soils and Sediments

Analysis of the Microbial Community Structure by Monitoring an Hg Methylation Gene (hgcA) in Paddy Soils along an Hg Gradient

Yu-Rong Liu, Ri-Qing Yu, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2014  |  Applied and Environmental Microbiology

Initial Copper Stress Strengthens the Resistance of Soil Microorganisms to a Subsequent Copper Stress

Jing Li, Yuan-Ming Zheng, Yu-Rong Liu, Yi-Bing Ma, Hang-Wei Hu, Ji Zheng He

Journal article  |  2014  |  Microbial Ecology

Response of ammonia oxidizing microbes to the stresses of arsenic and copper in two acidic alfisols

Gangavarapu Subrahmanyam, Hang-Wei Hu, Yuan-Ming Zheng, Gattupalli Archana, Ji-Zheng He, Yu-Rong Liu

Journal article  |  2014  |  Applied Soil Ecology

Review on iron availability in soil: interaction of Fe minerals, plants, and microbes

Claudio Colombo, Giuseppe Palumbo, Ji-Zheng He, Roberto Pinton, Stefano Cesco

Journal article  |  2014  |  Journal of Soils and Sediments

Particle size, charge and colloidal stability of humic acids coprecipitated with Ferrihydrite

Ruggero Angelico, Andrea Ceglie, Ji-Zheng He, Yu-Rong Liu, Giuseppe Palumbo, Claudio Colombo

Journal article  |  2014  |  Chemosphere

Shifts in the abundance and community structure of soil ammonia oxidizers in a wet sclerophyll forest under long-term prescribed burning

Xi-En Long, Chengrong Chen, Zhihong Xu, Ji-zheng He

Journal article  |  2014  |  Science of The Total Environment

[Environmental safety assessment on the new super absorbent polymers applied into a soil-Chinese cabbage system].

Xi Li, Ji-Zheng He, Yuan-Ming Zheng, Ming-Lan Zheng

Journal article  |  2014  |  Huanjing Kexue/Environmental Science

Super absorbent polymers (SAPs), a new water retention material, have a potential for application in water-saving agricultural pro..

[Characterization and soil environmental safety assessment of super absorbent polymers in agricultural application].

Xi Li, Yu-Rong Liu, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2014  |  Huanjing Kexue/Environmental Science

Super absorbent polymers (SAPs) are compounds that can absorb a lot of water which can be several folds of their original size and..

Effects of super-absorbent polymers on a soil-wheat (Triticum aestivum L.) system in the field

Xi Li, Ji-Zheng He, Jane M Hughes, Yu-Rong Liu, Yuan-Ming Zheng

Journal article  |  2014  |  Applied Soil Ecology

Iron-Manganese Nodules Harbor Lower Bacterial Diversity and Greater Proportions of Proteobacteria Compared to Bulk Soils in Four Locations Spanning from North to South China

Gui-You Zhang, Ji-Zheng He, Fan Liu, Li-Mei Zhang

Journal article  |  2014  |  Geomicrobiology Journal

Ammonia-Oxidizing Archaea Play a Predominant Role in Acid Soil Nitrification

Hang-Wei Hu, Zhi-Hong Xu, Ji-Zheng He

Journal article  |  2014  |  Advances in Agronomy

Effects and influence factors of dicyandiamide (DCD) application in agricultural ecosystem

Y Dai, JZ He, JP Shen

Journal article  |  2014  |  Chinese Journal of Applied Ecology

Linkage between community diversity of sulfate-reducing microorganisms and methylmercury concentration in paddy soil

Yu-Rong Liu, Yuan-Ming Zheng, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2014  |  Environmental Science and Pollution Research

Effects of nitrogen application rate and a nitrification inhibitor dicyandiamide on methanotroph abundance and methane uptake in a grazed pasture soil

Yu Dai, Hong J Di, Keith C Cameron, Ji-Zheng He

Journal article  |  2013  |  Environmental Science and Pollution Research

Long-Term Rice and Green Manure Rotation Alters the Endophytic Bacterial Communities of the Rice Root

Xiao-Xia Zhang, Ju-Sheng Gao, Yan-Hua Cao, Xiao-Tong Ma, Ji-Zheng He

Journal article  |  2013  |  Microbial Ecology

Effects of nitrogen application rate and a nitrification inhibitor dicyandiamide on ammonia oxidizers and N2O emissions in a grazed pasture soil

Yu Dai, Hong J Di, Keith C Cameron, Ji-Zheng He

Journal article  |  2013  |  Science of The Total Environment

Differential response of archaeal groups to land use change in an acidic red soil

Ju-Pei Shen, Peng Cao, Hang-Wei Hu, Ji-Zheng He

Journal article  |  2013  |  Science of the Total Environment

Contrasting Euryarchaeota communities between upland and paddy soils exhibited similar pH-impacted biogeographic patterns

Hang-Wei Hu, Li-Mei Zhang, Chao-Lei Yuan, Ji-Zheng He

Journal article  |  2013  |  Soil Biology and Biochemistry

pH-dependent distribution of soil ammonia oxidizers across a large geographical scale as revealed by high-throughput pyrosequencing

Hang-Wei Hu, Li-Mei Zhang, Yu Dai, Hong-Jie Di, Ji-Zheng He

Journal article  |  2013  |  Journal of Soils and Sediments

Molecular size distribution and shape of humic substance and ferrihydrite coprecipitated complexes

C Colombo, G Palumbo, R Angelico, A Ceglie, J He

Book Chapter  |  2013

Effects of land utilization patterns on soil microbial communities in an acid red soil based on DNA and PLFA analyses

Jiao-Yan Ying, Li-Mei Zhang, Wen-Xue Wei, Ji-Zheng He

Journal article  |  2013  |  Journal of Soils and Sediments

Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes

Jianjun Wang, Ji Shen, Yucheng Wu, Chen Tu, Janne Soininen, James C Stegen, Jizheng He, Xingqi Liu, Lu Zhang, Enlou Zhang

Journal article  |  2013  |  The ISME Journal

Metabolic scaling theory and its application in microbial ecology

J He, P Cao, Y Zheng

Journal article  |  2013  |  Acta Ecologica Sinica

Ecological Drivers of Biogeographic Patterns of Soil Archaeal Community

Yuan-Ming Zheng, Peng Cao, Bojie Fu, Jane M Hughes, Ji-Zheng He

Journal article  |  2013  |  PLoS One

Effects of Different Regeneration Scenarios and Fertilizer Treatments on Soil Microbial Ecology in Reclaimed Opencast Mining Areas on the Loess Plateau, China

Junjian Li, Yuanming Zheng, Junxia Yan, Hongjian Li, Xiang Wang, Jizheng He, Guangwei Ding

Journal article  |  2013  |  PLoS One

Effect of 7-year application of a nitrification inhibitor, dicyandiamide (DCD), on soil microbial biomass, protease and deaminase activities, and the abundance of bacteria and archaea in pasture soils

Yan J Guo, Hong J Di, Keith C Cameron, Bowen Li, Andriy Podolyan, Jim L Moir, Ross M Monaghan, L Chris Smith, Maureen O'Callaghan, Saman Bowatte, Deanne Waugh, Ji-Zheng He

Journal article  |  2013  |  Journal of Soils and Sediments

Effects of super absorbent polymers on soil microbial properties and Chinese cabbage (Brassica chinensis) growth

Xi Li, Ji-Zheng He, Yu-Rong Liu, Yuan-Ming Zheng

Journal article  |  2013  |  Journal of Soils and Sediments

Succession of plant and soil microbial communities with restoration of abandoned land in the Loess Plateau, China

Jun-Jian Li, Yuan-Ming Zheng, Jun-Xia Yan, Hong-Jian Li, Ji-Zheng He

Journal article  |  2013  |  Journal of Soils and Sediments

Insights into the responses of soil microbial community to the environmental disturbances

J Li, Y Liu, J He, Y Zheng

Journal article  |  2013  |  Huanjing Kexue Xuebao/Acta Scientiae Circumstantiae

Application of nano-scale secondary ion mass spectrometry to microbial ecology study

H Hu, L Zhang, J He

Journal article  |  2013  |  Acta Ecologica Sinica

Immediate effects of nitrogen, phosphorus, and potassium amendments on the methanotrophic activity and abundance in a Chinese paddy soil under short-term incubation experiment

Yong Zheng, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2013  |  Journal of Soils and Sediments

Current insights into the autotrophic thaumarchaeal ammonia oxidation in acidic soils

Ji-Zheng He, Hang-Wei Hu, Li-Mei Zhang

Journal article  |  2012  |  Soil Biology and Biochemistry

[Applications of archaeal membrane lipids in investigating archaeal community composition and its responses to environmental factors].

Peng Cao, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2012  |  Chinese Journal of Applied Ecology

Archaea, as the third life form distinct from bacteria and eukaryota, widely distribute in various kinds of habitats, and play imp..

Abundance and community structure of ammonia oxidizing bacteria and archaea in a Sweden boreal forest soil under 19-year fertilization and 12-year warming

Xien Long, Chengrong Chen, Zhihong Xu, Sune Linder, Jizheng He

Journal article  |  2012  |  Journal of Soils and Sediments

Toxicity of profenofos to the springtail, Folsomia candida, and ammonia-oxidizers in two agricultural soils

Yu-Rong Liu, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2012  |  Ecotoxicology

Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils

Li-Mei Zhang, Hang-Wei Hu, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2012  |  The ISME Journal: multidisciplinary journal of microbial ecology

[A novel archaeal phylum: thaumarchaeota--a review].

Limei Zhang, Jizheng He

Journal article  |  2012  |  Wei sheng wu xue bao = Acta microbiologica Sinica

Based on the archaeal 16S rRNA gene phylogenetic tree, the archaeal domain is divided into two major phyla, Euryarchaeota and Cren..

Phylogenetic clustering increases with elevation for microbes

Jianjun Wang, Janne Soininen, Jizheng He, Ji Shen

Journal article  |  2012  |  Environmental Microbiology Reports

Characteristics of oxytetracycline sorption and potential bioavailability in soils with various physical-chemical properties

Weidong Kong, Chunge Li, Jenna M Dolhi, Songyang Li, Jizheng He, Min Qiao

Journal article  |  2012  |  Chemosphere

Distribution and diversity of archaeal communities in selected Chinese soils

Peng Cao, Li-Mei Zhang, Ju-Pei Shen, Yuan-Ming Zheng, Hong J Di, Ji-Zheng He

Journal article  |  2012  |  FEMS Microbiology Ecology

Abundance and community structure of ammonia-oxidizing bacteria and archaea in a temperate forest ecosystem under ten-years elevated CO2

Xien Long, Chengrong Chen, Zhihong Xu, Ram Oren, Ji-Zheng He

Journal article  |  2012  |  Soil Biology and Biochemistry

Effects of long-term fertilization on the diversity of bacterial mercuric reductase gene in a Chinese upland soil

Yu-Rong Liu, Ji-Zheng He, Li-Mei Zhang, Yuan-Ming Zheng

Journal article  |  2012  |  Journal of Basic Microbiology

Responses of activities, abundances and community structures of soil denitrifiers to short-term mercury stress

Zhifeng Zhou, Yuanming Zheng, Jupei Shen, Limei Zhang, Yurong Liu, Jizheng He

Journal article  |  2012  |  Journal of Environmental Sciences

A review of ammonia-oxidizing bacteria and archaea in Chinese soils

Ju-Pei Shen, Li-Mei Zhang, Hong J Di, Ji-Zheng He

Journal article  |  2012  |  Frontiers in Microbiology

[Abundance of archaea, crenarchaea and bacteria in selected agricultural soils of China].

Ju-Pei Shen, Li-Mei Zhang, Ju-Pei He

Journal article  |  2011  |  Chinese Journal of Applied Ecology

Eukaryota, bacteria and archaea are the three domains of life. As the third domain of life, archaea has been found not only in ext..

Response of denitrification genes nirS, nirK, and nosZ to irrigation water quality in a Chinese agricultural soil

Zhi-Feng Zhou, Yuan-Ming Zheng, Ju-Pei Shen, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2011  |  Environmental Science and Pollution Research

Nitrogen loading levels affect abundance and composition of soil ammonia oxidizing prokaryotes in semiarid temperate grassland

Xin-Yi Shen, Li-Mei Zhang, Ju-Pei Shen, Ling-Hao Li, Chao-Lei Yuan, Ji-Zheng He

Journal article  |  2011  |  Journal of Soils and Sediments

Responses of microbes-mediated carbon and nitrogen cycles to global climate change

J Shen, J He

Journal article  |  2011  |  Shengtai Xuebao/ Acta Ecologica Sinica

Effects of mercury on reproduction, avoidance, and heat shock protein gene expression of the soil springtail Folsomia candida (vol 29, pg 654, 2010)

YR Liu, YM Zheng, LM Zhang, YX Luan, JZ He

Journal article  |  2011  |  Environmental Toxicology and Chemistry

Methanotroph abundance not affected by applications of animal urine and a nitrification inhibitor, dicyandiamide, in six grazed grassland soils

Hong Jie Di, Keith C Cameron, Ju-Pei Shen, Chris S Winefield, Maureen O'Callaghan, Saman Bowatte, Ji-Zheng He

Journal article  |  2011  |  Journal of Soils and Sediments

Abundance and community structure of ammonia-oxidizing archaea and bacteria in an acid paddy soil

Xin Chen, Li-Mei Zhang, Ju-Pei Shen, Wen-Xue Wei, Ji-Zheng He

Journal article  |  2011  |  Biology and Fertility of Soils

Progress in Significant Soil Science Fields of China over the Last Three Decades: A Review

Qi-Guo Zhao, Ji-Zheng He, Xiao-Yuan Yan, Bin Zhang, Gan-Lin Zhang, Zu-Cong Cai

Journal article  |  2011  |  Pedosphere

Archaeal community structure along a gradient of petroleum contamination in saline-alkali soil

Xinxin Wang, Zhen Han, Zhihui Bai, Jingchun Tang, Anzhou Ma, Jizheng He, Guoqiang Zhuang

Journal article  |  2011  |  Journal of Environmental Sciences

Soil type determines the abundance and community structure of ammonia-oxidizing bacteria and archaea in flooded paddy soils

Xin Chen, Li-Mei Zhang, Ju-Pei Shen, Zhihong Xu, Ji-Zheng He

Journal article  |  2010  |  Journal of Soils and Sediments

The Spatial Factor, Rather than Elevated CO2, Controls the Soil Bacterial Community in a Temperate Forest Ecosystem

Yuan Ge, Chengrong Chen, Zhihong Xu, Ram Oren, Ji-Zheng He

Journal article  |  2010  |  Applied and Environmental Microbiology

Autotrophic ammonia oxidation by soil thaumarchaea

Li-Mei Zhang, Pierre R Offre, Ji-Zheng He, Daniel T Verhamme, Graeme W Nicol, James I Prosser

Journal article  |  2010  |  Proceedings of the National Academy of Sciences of the United States of America

Impact of long-term fertilization practices on the abundance and composition of soil bacterial communities in Northeast China

Ju-Pei Shen, Li-Mei Zhang, Jun-Fu Guo, Jessica L Ray, Ji-Zheng He

Journal article  |  2010  |  Applied Soil Ecology

Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in Lake Taihu, China

Yucheng Wu, Yan Xiang, Jianjun Wang, Jicheng Zhong, Jizheng He, Qinglong L Wu

Journal article  |  2010  |  Environmental Microbiology Reports

Effects of mercury on the activity and community composition of soil ammonia oxidizers

Yu-Rong Liu, Yuan-Ming Zheng, Ju-Pei Shen, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2010  |  Environmental Science and Pollution Research

Molecular environmental soil science at the interfaces in the Earth's critical zone PREFACE

Jianming Xu, Caixian Tang, Jizheng He

Journal article  |  2010  |  Journal of Soils and Sediments

Nitrous oxide emissions from grazed grassland as affected by a nitrification inhibitor, dicyandiamide, and relationships with ammonia-oxidizing bacteria and archaea

Hong J Di, Keith C Cameron, Rob R Sherlock, Ju-Pei Shen, Ji-Zheng He, Chis S Winefield

Journal article  |  2010  |  Journal of Soils and Sediments

Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions

Hong J Di, Keith C Cameron, Ju-Pei Shen, Chris S Winefield, Maureen O'Callaghan, Saman Bowatte, Ji-Zheng He

Journal article  |  2010  |  FEMS Microbiology Ecology

Cr(III) oxidation coupled with Mn(II) bacterial oxidation in the environment

Ji-Zheng He, You-Ting Meng, Yuan-Ming Zheng, Li-Mei Zhang

Journal article  |  2010  |  Journal of Soils and Sediments

Functional assembly of bacterial communities with activity for the biodegradation of an organophosphorus pesticide in the rape phyllosphere

Jiying Ning, Zhihui Bai, Gang Gang, Dan Jiang, Qing Hu, Jizheng He, Hongxun Zhang, Guoqiang Zhuang

Journal article  |  2010  |  FEMS Microbiology Letters

Putative ammonia-oxidizing bacteria and archaea in an acidic red soil with different land utilization patterns

Jiao-Yan Ying, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2010  |  Environmental Microbiology Reports

EFFECTS OF MERCURY ON REPRODUCTION, AVOIDANCE, AND HEAT SHOCK PROTEIN GENE EXPRESSION OF THE SOIL SPRINGTAIL FOLSOMIA CANDIDA

Yu-Rong Liu, Yuan-Ming Zheng, Li-Mei Zhang, Yun-Xia Luan, Ji-Zheng He

Journal article  |  2010  |  Environmental Toxicology and Chemistry

Carbon/nitrogen ratio as a major factor for predicting the effects of organic wastes on soil bacterial communities assessed by DNA-based molecular techniques

Yuan Ge, Chengrong Chen, Zhihong Xu, Simon M Eldridge, Kwong Yin Chan, Yan He, Ji-Zheng He

Journal article  |  2010  |  Environmental Science and Pollution Research

Dynamics of sulfate reduction and sulfate-reducing prokaryotes in anaerobic paddy soil amended with rice straw

Ji-Zheng He, Xin-Zhan Liu, Yong Zheng, Ju-Pei Shen, Li-Mei Zhang

Journal article  |  2010  |  Biology and Fertility of Soils

Effects of Cd and Pb on soil microbial community structure and activities

Sardar Khan, Abd El-Latif Hesham, Min Qiao, Shafiqur Rehman, Ji-Zheng He

Journal article  |  2010  |  Environmental Science and Pollution Research

Population Dynamics of Ammonia Oxidizing Bacteria and Archaea and Relationships with Nitrification Rate in New Zealand Grazed Grassland Soils

Hong Jie Di, Keith C Cameron, Jupei Shen, Jizheng He, Chris S Winfield, Maureen O'Callaghan, Saman Bowatte

Conference Proceedings  |  2010  |  MOLECULAR ENVIRONMENTAL SOIL SCIENCE AT THE INTERFACES IN THE EARTH'S CRITICAL ZONE

Soil Micro-interfaces Control the Fate of Pollutants in Soil Environment

Jizheng He, Yuanming Zheng

Conference Proceedings  |  2010  |  MOLECULAR ENVIRONMENTAL SOIL SCIENCE AT THE INTERFACES IN THE EARTH'S CRITICAL ZONE

Do land utilization patterns affect methanotrophic communities in a Chinese upland red soil?

Yong Zheng, Xinzhan Liu, Limei Zhang, Zhifeng Zhou, Jizheng He

Journal article  |  2010  |  Journal of Environmental Sciences

Effect of Soil Hg Stress on Expression of Heat Shock Protein Gene in Springtail Folsomia Candida

Yurong Liu, Yuanming Zheng, Yu Da, Jizheng He

Conference Proceedings  |  2010  |  MOLECULAR ENVIRONMENTAL SOIL SCIENCE AT THE INTERFACES IN THE EARTH'S CRITICAL ZONE

Effect of long-term fertilization on total soil arsenic in China

Feng Li, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2010  |  Annals of the New York Academy of Sciences

Kinetics of soil cadmium desorption under simulated acid rain

Dai-Zhang Wang, Xin Jiang, Wei Rao, Ji-Zheng He

Journal article  |  2009  |  Ecological Complexity

Linking soil bacterial diversity to ecosystem multifunctionality using backward-elimination boosted trees analysis

Ji-Zheng He, Yuan Ge, Zhihong Xu, Chengrong Chen

Journal article  |  2009  |  Journal of Soils and Sediments

A lysimeter study of nitrate leaching from grazed grassland as affected by a nitrification inhibitor, dicyandiamide, and relationships with ammonia oxidizing bacteria and archaea

HJ Di, KC Cameron, JP Shen, JZ He, CS Winefield

Journal article  |  2009  |  Soil Use and Management

Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest

Li-Mei Zhang, Mu Wang, James I Prosser, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2009  |  FEMS Microbiology Ecology

Showcasing microbial ecology research in China

Jizheng He, James I Prosser, Yongguan Zhu

Journal article  |  2009  |  FEMS Microbiology Ecology

Editorial: Showcasing microbial ecology research in China

J He, Y Zhu, JI Prosser

Journal article  |  2009  |  FEMS Microbiology Ecology

Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest

JZ He, LM Zhang, M Wang, JI Prosser, YM Zheng

Journal article  |  2009  |  FEMS Microbiology Ecology

Advance in the research of soil non-thermophilic Crenarchaeota

JZ He, JP Shen, LM Zhang

Journal article  |  2009  |  Shengtai Xuebao/ Acta Ecologica Sinica

Biodegradation of pyrene and catabolic genes in contaminated soils cultivated with Lolium multiflorum L

Sardar Khan, Abd El-Latif Hesham, Gu Qing, Liu Shuang, Jizheng He

Journal article  |  2009  |  Journal of Soils and Sediments

The sulfate-reducing bacteria and surfer cycle in paddy soil

XZ Liu, JZ He, Z Li-Mei

Journal article  |  2009  |  Shengtai Xuebao/ Acta Ecologica Sinica

Advances in thermoacidophilic methanotrophs from extreme environments

Y Zheng, YM Zheng, LM Zhang, JZ He

Journal article  |  2009  |  Shengtai Xuebao/ Acta Ecologica Sinica

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

HJ Di, KC Cameron, JP Shen, CS Winefield, M O'Callaghan, S Bowatte, JZ He

Journal article  |  2009  |  Nature Geoscience

Biogenic Mn oxides for effective adsorption of Cd from aquatic environment

You-Ting Meng, Yuan-Ming Zheng, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2009  |  Environmental Pollution

Seasonal dynamic changes in bacterial compositions in the Inner Mongolia desert steppe

P Lu, W Ma, H Li, Y Wu, G Lv, J He

Journal article  |  2009  |  Frontiers of Biology in China

Abundance and community structure of sulfate reducing prokaryotes in a paddy soil of southern China under different fertilization regimes

Xin-Zhan Liu, Li-Mei Zhang, James I Prosser, Ji-Zheng He

Journal article  |  2009  |  Soil Biology and Biochemistry

Microbes influence the fractionation of arsenic in paddy soils with different fertilization regimes

Feng Li, Yuan-Ming Zheng, Ji-Zheng He

Journal article  |  2009  |  Science of The Total Environment

Trends and challenges in soil research 2009: linking global climate change to local long-term forest productivity

Zhihong Xu, Chengrong Chen, Jizheng He, Juxiu Liu

Journal article  |  2009  |  Journal of Soils and Sediments

[Formation and reactions of biogenic manganese oxides with heavy metals in environment].

You-Ting Meng, Yuan-Ming Zheng, Li-Mei Zhang, Ji-Zheng He

Journal article  |  2009  |  Huanjing Kexue/Environmental Science

Manganese (Mn) oxides are common minerals in natural environments that may play an important role in the biogeochemical cycles of ..

Advances in ammonia-oxidizing microorganisms and global nitrogen cycle

JZ He, LM Zhang

Journal article  |  2009  |  Shengtai Xuebao/ Acta Ecologica Sinica

Adsorption of heavy metals by biogenic manganese oxides

S Jin, J He, Y Zheng, Y Meng, L Zhang

Journal article  |  2009  |  Huanjing Kexue Xuebao / Acta Scientiae Circumstantiae

Synthesis of todorokite-type manganese oxide from Cu-buserite by controlling the pH at atmospheric pressure

Haojie Cui, Xionghan Feng, Wenfeng Tan, Jizheng He, Ronggui Hu, Fan Liu

Journal article  |  2009  |  Microporous and Mesoporous Materials

Soil environmental micro-interfaces and pollution control

J He, Y Zheng, J Qu

Journal article  |  2009  |  Huanjing Kexue Xuebao / Acta Scientiae Circumstantiae

Recent advances in soil microbial biogeography

JZ He, Y Ge

Journal article  |  2008  |  Shengtai Xuebao/ Acta Ecologica Sinica

Effect of Long-Term Application of Chemical Fertilizers on Microbial Biomass and Functional Diversity of a Black Soil

Wei-Dong Kong, Yong-Guan Zhu, Bo-Jie Fu, Xiao-Zeng Han, Lei Zheng, Ji-Zheng He

Journal article  |  2008  |  Pedosphere

Risk assessment of pig manure Cu-contamination of black soil in Northeast China

YJ Zhu, YM Zheng, JZ He, LH Li, L Zhang

Journal article  |  2008  |  Chinese Journal of Applied Ecology

[Risk assessment of pig manure Cu-contamination of black soil in northeast China].

Yi-Jun Zhu, Yuan-ming Zheng, Ji-zheng He, Ling-hao Li, Lei Zhang

Journal article  |  2008  |  Ying yong sheng tai xue bao = The journal of applied ecology / Zhongguo sheng tai xue xue hui, Zhongguo ke xue yuan Shenyang ying yong sheng tai yan jiu suo zhu ban

Copper (Cu) is massively used as feed additives in intensive farms, and the discharge and utilization of livestock wastes may caus..

Review of reactions of manganese oxides with organic compounds and applications of MnOx in environmental remediation

S Jin, L Zhang, J He

Journal article  |  2008  |  Huanjing Kexue Xuebao / Acta Scientiae Circumstantiae

Abundance and community composition of methanotrophs in a Chinese paddy soil under long-term fertilization practices

Yong Zheng, Li-Mei Zhang, Yuan-Ming Zheng, Hongjie Di, Ji-Zheng He

Journal article  |  2008  |  Journal of Soils and Sediments

Microbial composition and diversity of an upland red soil under long-term fertilization treatments as revealed by culture-dependent and culture-independent approaches

Ji-Zheng He, Yong Zheng, Cheng-Rong Chen, Yuan-Qiu He, Li-Mei Zhang

Journal article  |  2008  |  Journal of Soils and Sediments

Change of bacterial communities in sediments along Songhua River in Northeastern China after a nitrobenzene pollution event

Dong Li, Min Yang, Zonglai Li, Rong Qi, Jizheng He, Huijuan Liu

Journal article  |  2008  |  FEMS Microbiology Ecology

Ammonia-oxidizing archaea: important players in paddy rhizosphere soil?

Xue-Ping Chen, Yong-Guan Zhu, Yue Xia, Ju-Pei Shen, Ji-Zheng He

Journal article  |  2008  |  ENVIRONMENTAL MICROBIOLOGY

Mercury in soils of three agricultural experimental stations with long-term fertilization in China

Yuan-Ming Zheng, Yu-Rong Liu, Hong-Qing Hu, Ji-Zheng He

Journal article  |  2008  |  Chemosphere

Microbial DNA extraction and analyses of soil iron-manganese nodules

Li-Mei Zhang, Fan Liu, Wen-Feng Tan, Xiong-Han Feng, Yong-Guan Zhu, Jizheng He

Journal article  |  2008  |  Soil Biology and Biochemistry

Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam

Ju-Pei Shen, Li-Mei Zhang, Yong-guan Zhu, Jia-bao Zhang, Ji-zheng He

Journal article  |  2008  |  ENVIRONMENTAL MICROBIOLOGY

Do water regimes affect iron-plaque formation and microbial communities in the rhizosphere of paddy rice?

Xue-Ping Chen, Wei-Dong Kong, Ji-Zheng He, Wen-Ju Liu, Sally E Smith, F Andrew Smith, Yong-Guan Zhu

Journal article  |  2008  |  Journal of Plant Nutrition and Soil Science

Determination of the point-of-zero, charge of manganese oxides with different methods including an improved salt titration method

Wen-feng Tan, Si-jun Lu, Fan Liu, Xiong-han Feng, Ji-zheng He, Lua K Koopall

Journal article  |  2008  |  SOIL SCIENCE

Determination of the point-of-zero charge of manganese oxides with different methods including an improved salt titration method

WF Tan, SJ Lu, F Liu, XH Feng, JZ He, LK Koopal

Journal article  |  2008  |  Soil Science

Differences in soil bacterial diversity: driven by contemporary disturbances or historical contingencies?

Yuan Ge, Ji-zheng He, Yong-guan Zhu, Jia-bao Zhang, Zhihong Xu, Li-mei Zhang, Yuan-ming Zheng

Journal article  |  2008  |  ISME JOURNAL

Long-term Fertilization Regimes Affect Bacterial Community Structure and Diversity of an Agricultural Soil in Northern China

Yuan Ge, Jia-bao Zhang, Li-mei Zhang, Min Yang, Ji-zheng He

Journal article  |  2008  |  Journal of Soils and Sediments

Multivariate geostatistical analysis of heavy metals in topsoils from Beijing, China

Yuan-Ming Zheng, Tong-Bin Chen, Ji-Zheng He

Journal article  |  2008  |  Journal of Soils and Sediments

Bacterial communities inside and surrounding soil iron-manganese nodules

Jizheng He, Limei Zhang, Shengsheng Jin, Yongguan Zhu, Fan Liu

Journal article  |  2008  |  Geomicrobiology Journal

Does long-term fertilization treatment affect the response of soil ammonia-oxidizing bacterial communities to Zn contamination?

Yue Xia, Yong-Guan Zhu, Qing Gu, Ji-Zheng He

Journal article  |  2007  |  Plant and Soil

Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices (vol 9, pg 2364, 2007)

Ji-zheng He, Ju-pei Shen, Li-mei Zhang, Yong-guan Zhu, Yuan-ming Zheng, Ming-gang Xu, Hongjie Di

Journal article  |  2007  |  Environmental Microbiology

Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices

Ji-zheng He, Ju-pei Shen, Li-mei Zhang, Yong-guan Zhu, Yuan-ming Zheng, Ming-gang Xu, Hongjie Di

Journal article  |  2007  |  Environmental Microbiology

Molecular mechanisms of copper tolerance and co-bioremediation of copper contaminated environment

J Li, JZ He, YH Ma, YG Zhu, L Zhang

Journal article  |  2007  |  Shengtai Xuebao/ Acta Ecologica Sinica

Adsorption and redox reactions of heavy metals on synthesized Mn oxide minerals

Xiong Han Feng, Li Mei Zhai, Wen Feng Tan, Fan Liu, Ji Zheng He

Journal article  |  2007  |  Environmental Pollution

Section 5: Soil and landscape ecology

Jizheng Jim He

Journal article  |  2007  |  Journal of Soils and Sediments

Effect of selected organic acids on cadmium sorption by variable- and permanent-charge soils

Hong-Qing Hu, Hua-Liang Liu, Ji-Zheng He, Qiao-Yun Huang

Journal article  |  2007  |  Pedosphere

[Methodology and application of soil metagenomics].

Ju-pei Shen, Li-mei Zhang, Yuan-ming Zheng, Yong-guan Zhu, Ji-zheng He

Journal article  |  2007  |  Chinese Journal of Applied Ecology

Culturable microorganisms provide very limited information on soil microbial diversity, because only 0.1%-10% of soil microorganis..

Soil enzymatic activities and microbial community structure with different application rates of Cd and Pb

Sardar Khan, Qing Cao, Abd El-Latif Hesham, Yue Xia, Ji-zheng He

Journal article  |  2007  |  Journal of Environmental Sciences

Adsorption (As-III,As-V) and oxidation (As-III) of arsenic by pedogenic Fe-Mn nodules

Zheng Chen, Kyoung-Woong Kim, Yong-Guan Zhu, Ron McLaren, Fan Liu, Ji-Zheng He

Journal article  |  2006  |  Geoderma

Effects of reaction conditions on the formation of todorokite at atmospheric pressure

Hao-Jie Cui, Xiong-Han Feng, Ji-Zng He he, Wen-Feng Tan, Fan Liu

Journal article  |  2006  |  Clays and Clay Minerals

The veterinary antibiotic oxytetracycline and Cu influence functional diversity of the soil microbial community

W-D Kong, Y-G Zhu, B-J Fu, P Marschner, J-Z He

Journal article  |  2006  |  Environmental Pollution

The controlling effect of pH on oxidation of Cr(III) by manganese oxide minerals

XH Feng, LM Zhai, WF Tan, W Zhao, F Liu, JZ He

Journal article  |  2006  |  Journal of Colloid and Interface Science

Stable isotope probing and its applications in microbial ecology

Y Ge, JZ He, YM Zheng, LM Zhang, YG Zhu

Journal article  |  2006  |  Acta Ecologica Sinica

Molecular bacterial diversity of a forest soil under residue management regimes in subtropical Australia

JZ He, ZH Xu, J Hughes

Journal article  |  2006  |  FEMS Microbiology Ecology

Oxidation of As-III by several manganese oxide minerals in absence and presence of goethite

Xionghan Feng, Wenfeng Tan, Fan Liu, Huada Daniel Ruan, Jizheng He

Journal article  |  2006  |  Acta Geologica Sinica - English Edition

Pre-lysis washing improves DNA extraction from a forest soil

JZ He, ZH Xu, J Hughes

Journal article  |  2005  |  Soil Biology and Biochemistry

Factors governing formation of todorokite at atmospheric pressure

HJ Cui, XH Feng, F Liu, WF Tan, JZ He

Journal article  |  2005  |  Science in China Series D

Analyses of soil fungal communities in adjacent natural forest and hoop pine plantation ecosystems of subtropical Australia using molecular approaches based on 18S rRNA genes

JZ He, ZH Xu, J Hughes

Journal article  |  2005  |  FEMS Microbiology Letters