Jon Cleary

Microstructural correlates of 23Na relaxation in human brain at 7 Tesla.

Scott C Kolbe, Warda Syeda, Yasmin Blunck, Rebecca Glarin, Meng Law, Leigh A Johnston, Jon O Cleary

Journal article  |  2020  |  Neuroimage

23Na provides the second strongest MR-observable signal in biological tissue and exhibits bi-exponential T2∗ relaxation in micro-e..

Compressed sensing effects on quantitative analysis of undersampled human brain sodium MRI

Yasmin Blunck, Scott C Kolbe, Bradford A Moffat, Roger J Ordidge, Jon O Cleary, Leigh A Johnston

Journal article  |  2020  |  Magnetic Resonance in Medicine

Purpose The clinical application of sodium MRI is hampered due to relatively low image quality and associated long acquisition tim..

A continuum of T-2(*) components: Flexible fast fraction mapping in sodium MRI

Warda Syeda, Yasmin Blunck, Scott Kolbe, Jon O Cleary, Leigh A Johnston

Journal article  |  2019  |  Magnetic Resonance in Medicine

PURPOSE: Parameter mapping in sodium MRI data is challenging due to inherently low SNR and spatial resolution, prompting the need ..

Zero-gradient-excitation ramped hybrid encoding (zG(RF)-RHE) sodium MRI

Yasmin Blunck, Bradford A Moffat, Scott C Kolbe, Roger J Ordidge, Jon O Cleary, Leigh A Johnston

Journal article  |  2019  |  Magnetic Resonance in Medicine

Optimized partial-coverage functional analysis pipeline (OPFAP): a semi-automated pipeline for skull stripping and co-registration of partial-coverage, ultra-high-field functional images

Peter E Yoo, Jon O Cleary, Scott C Kolbe, Roger J Ordidge, Terence J O'Brien, Nicholas L Opie, Sam E John, Thomas J Oxley, Bradford A Moffat

Journal article  |  2018  |  Magnetic Resonance Materials in Physics, Biology and Medicine

3D-multi-echo radial imaging of Na-23 (3D-MERINA) for time-efficient multi-parameter tissue compartment mapping

Yasmin Blunck, Sonal Josan, Syeda Warda Taqdees, Bradford A Moffat, Roger J Ordidge, Jon O Cleary, Leigh A Johnston

Journal article  |  2018  |  Magnetic Resonance in Medicine

7T-fMRI: Faster temporal resolution yields optimal BOLD sensitivity for functional network imaging specifically at high spatial resolution

Peter E Yoo, Sam E John, Shawna Farquharson, Jon O Cleary, Yan T Wong, Amanda Ng, Claire B Mulcahy, David B Grayden, Roger J Ordidge, Nicholas L Opie, Terence J O'Brien, Thomas J Oxley, Bradford A Moffat

Journal article  |  2018  |  NEUROIMAGE

The significance of incidental brain uptake on Ga-68-DOTATATE PET-CT in neuroendocrine tumour patients

Jon O Cleary, Jason Yeung, Helena McMeekin, Thomas Wilhelm, Thomas Wagner

Journal article  |  2016  |  Nuclear Medicine Communications

Fully-Automated mu MRI Morphometric Phenotyping of the Tc1 Mouse Model of Down Syndrome

Nick M Powell, Marc Modat, M Jorge Cardoso, Da Ma, Holly E Holmes, Yichao Yu, James O'Callaghan, Jon O Cleary, Ben Sinclair, Frances K Wiseman, Victor LJ Tybulewicz, Elizabeth MC Fisher, Mark F Lythgoe, Sebastien Ourselin

Journal article  |  2016  |  PLOS ONE

Diffusion Microscopic MRI of the Mouse Embryo: Protocol and Practical Implementation in the splotch Mouse Model

Francesca C Norris, Bernard M Siow, Jon O Cleary, Jack A Wells, Sandra CP De Castro, Roger J Ordidge, Nicholas DE Greene, Andrew J Copp, Peter J Scambler, Daniel C Alexander, Mark F Lythgoe

Journal article  |  2015  |  Magnetic Resonance in Medicine

Magnetic Resonance Imaging

JOSH Cleary, AR Guimarães

Book Chapter  |  2014

Multi-modal pharmacokinetic modelling for DCE-MRI: using diffusion weighted imaging to constrain the local arterial input function

Valentin Hamy, Marc Modat, Rebecca Shipley, Nikos Dikaios, Jon Cleary, Shonit Punwani, Sebastien Ourselin, David Atkinson, Andrew Melbourne

Conference Proceedings  |  2014  |  Medical Imaging 2014: Image Processing

Enhanced Tissue Differentiation in the Developing Mouse Brain Using Magnetic Resonance Micro-Histology

Francesca C Norris, Joanne Betts-Henderson, Jack A Wells, Jon O Cleary, Bernard M Siow, Simon Walker-Samuel, Karen McCue, Paolo Salomoni, Peter J Scambler, Mark F Lythgoe

Journal article  |  2013  |  Magnetic Resonance in Medicine

Segmentation propagation using a 3D embryo atlas for high-throughput MRI phenotyping: Comparison and validation with manual segmentation

Francesca C Norris, Marc Modat, Jon O Cleary, Anthony N Price, Karen Mccue, Peter J Scambler, Sebastien Ourselin, Mark F Lythgoe

Journal article  |  2013  |  Magnetic Resonance in Medicine

In vivo photoacoustic imaging of mouse embryos

Jan Laufer, Francesca Norris, Jon Cleary, Edward Zhang, Bradley Treeby, Ben Cox, Peter Johnson, Pete Scambler, Mark Lythgoe, Paul Beard

Journal article  |  2012  |  Journal of Biomedical Optics

Structural correlates of active-staining following magnetic resonance microscopy in the mouse brain

Jon O Cleary, Frances K Wiseman, Francesca C Norris, Anthony N Price, ManKin Choy, Victor LJ Tybulewicz, Roger J Ordidge, Sebastian Brandner, Elizabeth MC Fisher, Mark F Lythgoe

Journal article  |  2011  |  Neuroimage

Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping

Jon O Cleary, Marc Modat, Francesca C Norris, Anthony N Price, Sujatha A Jayakody, Juan Pedro Martinez-Barbera, Nicholas DE Greene, David J Hawkes, Roger J Ordidge, Peter J Scambler, Sebastien Ourselin, Mark F Lythgoe

Journal article  |  2011  |  Neuroimage

Cardiovascular magnetic resonance imaging in experimental models.

Anthony N Price, King K Cheung, Jon O Cleary, Adrienne E Campbell, Johannes Riegler, Mark F Lythgoe

Journal article  |  2010  |  The Open Cardiovascular Medicine Journal

Cardiovascular magnetic resonance (CMR) imaging is the modality of choice for clinical studies of the heart and vasculature, offer..

Comparison of Segmentation Methods for MRI Measurement of Cardiac Function in Rats

Johannes Riegler, King K Cheung, Yiu Fung Man, Jon O Cleary, Anthony N Price, Mark F Lythgoe

Journal article  |  2010  |  Journal of Magnetic Resonance Imaging

Photoacoustic imaging of vascular networks in transgenic mice

JG Laufer, JO Cleary, EZ Zhang, MF Lythgoe, PC Beard

Conference Proceedings  |  2010  |  Photons Plus Ultrasound: Imaging and Sensing 2010

Postmortem Examination of Human Fetuses: A Comparison of Whole-Body High-Field MRI at 9.4 Tesla With Conventional MRI and Invasive Autopsy EDITORIAL COMMENT

Sudhin Thayyil, Jon O Cleary, Neil J Sebire, Rosemary J Scott, Kling Chong, Roxanna Gunny, Catherine M Owens, Oystein E Olsen, Amaka C Offiah, Harold G Parks, Lyn S Chitty, Anthony N Price, Tarek A Yousry, Nicola J Robertson, Mark F Lythgoe, Andrew M Taylor

Journal article  |  2009  |  Obstetrical & Gynecological Survey

Cardiac phenotyping in ex vivo murine embryos using mu MRI

Jon O Cleary, Anthony N Price, David L Thomas, Peter J Scambler, Vanessa Kyriakopoulou, Karen McCue, Juergen E Schneider, Roger J Ordidge, Mark F Lythgoe

Journal article  |  2009  |  NMR in Biomedicine

Post-mortem examination of human fetuses: a comparison of whole-body high-field MRI at 9.4 T with conventional MRI and invasive autopsy

Sudhin Thayyil, Jon O Cleary, Neil J Sebire, Rosemary J Scott, Kling Chong, Roxanna Gunny, Catherine M Owens, Oystein E Olsen, Amaka C Offiah, Harold G Parks, Lyn S Chitty, Anthony N Price, Tarek A Yousry, Nicola J Robertson, Mark F Lythgoe, Andrew M Taylor

Journal article  |  2009  |  The Lancet