Ruidong Xiang

In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants.

Tuan V Nguyen, Christy J Vander Jagt, Jianghui Wang, Hans D Daetwyler, Ruidong Xiang, Michael E Goddard, Loan T Nguyen, Elizabeth M Ross, Ben J Hayes, Amanda J Chamberlain, Iona M MacLeod

Journal article  |  2023  |  Genet Sel Evol

Studies have demonstrated that structural variants (SV) play a substantial role in the evolution of species and have an impact on ..

552. Regulatory QTL and exon expression QTL in the mammary gland of dairy cows

CP Prowse-Wilkins, TJ Lopdell, R Xiang, CJ Vander Jagt, MD Littlejohn, AJ Chamberlain, ME Goddard

Conference Proceedings  |  2022  |  Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP)

180. Strategies to find predictive variants that improve multi-breed genomic prediction in dairy cattle

I van den Berg, R Xiang, M Khansefid, ME Goddard, JE Pryce, CP Prowse-Wilkins, AJ Chamberlain, IM MacLeod

Conference Proceedings  |  2022  |  Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP)

537. Large-scale ‘omics fine-mapping identifies expression quantitative trait loci significantly affecting cattle phenotypes

R Xiang, ME Goddard, CP Prowse-Wilkins, CM Reich, BA Mason, JB Garner, LC Marett, IM MacLeod, AJ Chamberlain

Conference Proceedings  |  2022  |  Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP)

Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle.

Claire P Prowse-Wilkins, Thomas J Lopdell, Ruidong Xiang, Christy J Vander Jagt, Mathew D Littlejohn, Amanda J Chamberlain, Michael E Goddard

Journal article  |  2022  |  BMC Genomics

BACKGROUND: Causal variants for complex traits, such as eQTL are often found in non-coding regions of the genome, where they are h..

A multi-tissue atlas of regulatory variants in cattle.

Shuli Liu, Yahui Gao, Oriol Canela-Xandri, Sheng Wang, Ying Yu, Wentao Cai, Bingjie Li, Ruidong Xiang, Amanda J Chamberlain, Erola Pairo-Castineira, Kenton D'Mellow, Konrad Rawlik, Charley Xia, Yuelin Yao, Pau Navarro, Dominique Rocha, Xiujin Li, Ze Yan, Congjun Li, Benjamin D Rosen, et al.

Journal article  |  2022  |  Nat Genet

Characterization of genetic regulatory variants acting on livestock gene expression is essential for interpreting the molecular me..

Correction to: Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle.

Jigme Dorji, Christy J Vander Jagt, Josie B Garner, Leah C Marett, Brett A Mason, Coralie M Reich, Ruidong Xiang, Emily L Clark, Benjamin G Cocks, Amanda J Chamberlain, Iona M MacLeod, Hans D Daetwyler

Journal article  |  2022  |  BMC Genomics

Following publication of the original article [1], it was reported that Fig. 4 was missing several labels (I-IV) and that Addition..

Editorial: Multi-Layered Genome-Wide Association/Prediction in Animals.

Ruidong Xiang, Lingzhao Fang, Marie-Pierre Sanchez, Hao Cheng, Zhe Zhang

Journal article  |  2022  |  Front Genet

Mutant alleles differentially shape fitness and other complex traits in cattle

Ruidong Xiang, Ed J Breen, Sunduimijid Bolormaa, Christy J Vander Jagt, Amanda J Chamberlain, Iona M Macleod, Michael E Goddard

Journal article  |  2021  |  COMMUNICATIONS BIOLOGY

Mutant alleles (MAs) that have been classically recognised have large effects on phenotype and tend to be deleterious to traits an..

Putative Causal Variants Are Enriched in Annotated Functional Regions From Six Bovine Tissues (vol 12,664379, 2021)

Claire P Prowse-Wilkins, Jianghui Wang, Ruidong Xiang, Josie B Garner, Michael E Goddard, Amanda J Chamberlain

Journal article  |  2021  |  FRONTIERS IN GENETICS

[This corrects the article DOI: 10.3389/fgene.2021.664379.].