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Andrew Lonie's selected work
Assessing The Clinical Practice Of Accepting Kidney Donor Organs And Evaluating Donor Orga..
Sharing interoperable workflow provenance: A review of best practices and their practical ..
Displaying the 24 most recent projects by Andrew Lonie.
Displaying the 38 most recent scholarly works by Andrew Lonie.
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv.
Farah Zaib Khan, Stian Soiland-Reyes, Richard O Sinnott, Andrew Lonie, Carole Goble, Michael R Crusoe
Journal article | 2019 | GigaScience
BACKGROUND: The automation of data analysis in the form of scientific workflows has become a widely adopted practice in many field..
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
Maria Victoria Schneider, Philippa C Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan Watson-Haigh, Philipp E Bayer, Michael Charleston, Ira Cooke, Rob Cook, Richard J Edwards, David Edwards, Dominique Gorse, Malcolm McConville, David Powell, Marc R Wilkins, Andrew Lonie
Journal article | 2019 | Briefings in Bioinformatics
Is RNASEL:p.Glu265*a modifier of early-onset breast cancer risk for carriers of high-risk mutations?
Tu Nguyen-Dumont, Zhi L Teo, Fleur Hammet, Alexis Roberge, Maryam Mahmoodi, Helen Tsimiklis, Daniel J Park, Bernard J Pope, Andrew Lonie, Miroslav K Kapuscinski, Khalid Mahmood, David E Goldgar, Graham G Giles, Ingrid Winship, John L Hopper, Melissa C Southey
Journal article | 2018 | BMC Cancer
Genome-Wide Measures of Peripheral Blood Dna Methylation and Prostate Cancer Risk in a Prospective Nested Case-Control Study
Liesel M FitzGerald, Haroon Naeem, Enes Makalic, Daniel F Schmidt, James G Dowty, Jihoon E Joo, Chol-Hee Jung, Julie K Bassett, Pierre-Antoine Dugue, Jessica Chung, Andrew Lonie, Roger L Milne, Ee Ming Wong, John L Hopper, Dallas R English, Gianluca Severi, Laura Baglietto, John Pedersen, Graham G Giles, Melissa C Southey
Journal article | 2017 | The Prostate
Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case-control study
Pierre-Antoine Dugue, Maree T Brinkman, Roger L Milne, Ee Ming Wong, Liesel M FitzGerald, Julie K Bassett, Jihoon E Joo, Chol-Hee Jung, Enes Makalic, Daniel F Schmidt, Daniel J Park, Jessica Chung, Anthony D Ta, Damien M Bolton, Andrew Lonie, Anthony Longano, John L Hopper, Gianluca Severi, Richard Saffery, Dallas R English, et al.
Journal article | 2016 | British Journal of Cancer
Cpipe: a shared variant detection pipeline designed for diagnostic settings
Simon P Sadedin, Harriet Dashnow, Paul A James, Melanie Bahlo, Denis C Bauer, Andrew Lonie, Sebastian Lunke, Ivan Macciocca, Jason P Ross, Kirby R Siemering, Zornitza Stark, Susan M White, Graham Taylor, Clara Gaff, Alicia Oshlack, Natalie P Thorne
Journal article | 2015 | Genome Medicine
Whole-genome characterization of chemoresistant ovarian cancer
Ann-Marie Patch, Elizabeth L Christie, Dariush Etemadmoghadam, Dale W Garsed, Joshy George, Sian Fereday, Katia Nones, Prue Cowin, Kathryn Alsop, Peter J Bailey, Karin S Kassahn, Felicity Newell, Michael CJ Quinn, Stephen Kazakoff, Kelly Quek, Charlotte Wilhelm-Benartzi, Ed Curry, Huei San Leong, Anne Hamilton, Linda Mileshkin, et al.
Journal article | 2015 | Nature
Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer
Matthew KH Hong, Geoff Macintyre, David C Wedge, Peter Van Loo, Keval Patel, Sebastian Lunke, Ludmil B Alexandrov, Clare Sloggett, Marek Cmero, Francesco Marass, Dana Tsui, Stefano Mangiola, Andrew Lonie, Haroon Naeem, Nikhil Sapre, Pramit M Phal, Natalie Kurganovs, Xiaowen Chin, Michael Kerger, Anne Y Warren, et al.
Journal article | 2015 | Nature Communications
Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer
Gianluca Severi, Melissa C Southey, Dallas R English, Chol-hee Jung, Andrew Lonie, Catriona McLean, Helen Tsimiklis, John L Hopper, Graham G Giles, Laura Baglietto
Journal article | 2014 | Breast Cancer Research and Treatment
FAVR (Filtering and Annotation of Variants that are Rare): methods to facilitate the analysis of rare germline genetic variants from massively parallel sequencing datasets
Bernard J Pope, Nguyen-Dumont Tu, Fabrice Odefrey, Fleur Hammet, Russell Bell, Kayoko Tao, Sean V Tavtigian, David E Goldgar, Andrew Lonie, Melissa C Southey, Daniel J Park
Journal article | 2013 | BMC Bioinformatics
Rare Mutations in XRCC2 Increase the Risk of Breast Cancer
DJ Park, F Lesueur, T Nguyen-Dumont, M Pertesi, F Odefrey, F Hammet, SL Neuhausen, EM John, IL Andrulis, MB Terry, M Daly, S Buys, F Le Calvez-Kelm, A Lonie, BJ Pope, H Tsimiklis, C Voegele, FM Hilbers, N Hoogerbrugge, A Barroso, et al.
Journal article | 2012 | American Journal of Human Genetics
Displaying the most recent news article by Andrew Lonie.
Honours, Awards and Fellowships
Australian PhD Priority Scholarship
Director, Bioinformatics Commons & Senior Advisor
Medicine, Dentistry And Health Sciences
Doctor of Philosophy