Mr Kaan Öcal
Laureate Research Fellow in Theoretical Syst. Bio.
School of BioSciences
10 Scholarly works
0 Projects
HIGHLIGHTS
2025
Journal article
Methods in quantitative biology—from analysis of single-cell microscopy images to inference of predictive models for stochastic gene expression
DOI: 10.1088/1478-3975/adda852025
Journal article
Cell size distributions in lineages
DOI: 10.1103/PhysRevResearch.7.0133022024
Journal article
A stochastic vs deterministic perspective on the timing of cellular events
DOI: 10.1038/s41467-024-49624-z2023
Journal article
Model reduction for the Chemical Master Equation: An information-theoretic approach
DOI: 10.1063/5.01314452022
Journal article
Approximating solutions of the Chemical Master equation using neural networks
DOI: 10.1016/j.isci.2022.1050102022
Journal article
Inference and uncertainty quantification of stochastic gene expression via synthetic models
DOI: 10.1098/rsif.2022.01532020
Journal article
Training deep neural density estimators to identify mechanistic models of neural dynamics
DOI: 10.7554/ELIFE.56261
RECENT SCHOLARLY WORKS
2020
Journal article
Parameter estimation for biochemical reaction networks using Wasserstein distances
DOI: 10.1088/1751-8121/ab58772019
Book Chapter
Wasserstein Distances for Estimating Parameters in Stochastic Reaction Networks
DOI: 10.1007/978-3-030-31304-3_242017
Conference Proceedings
Flexible statistical inference for mechanistic models of neural dynamics