Dr Ouli Xie
Honorary Clinical Fellow
Department of Microbiology and Immunology
24 Scholarly works
0 Projects
HIGHLIGHTS
2026
Journal article
Strain-level transmission inference across multi-kingdom metagenomic data using TRACS.
DOI: 10.1038/s41564-026-02339-x2026
Journal article
Emergence of distinct Streptococcus pyogenes emm1 and emm12 lineages in China.
DOI: 10.1038/s41564-026-02324-42025
Journal article
From random care to randomized clinical trials of patients with invasive streptococcal infections—research prioritisation and areas of equipoise
DOI: 10.1016/j.cmicom.2025.1051372025
Journal article
Invasive Streptococcus dysgalactiae subspecies equisimilis compared with Streptococcus pyogenes in Australia, 2011–23, and the emergence of a multi-continent stG62647 lineage: a retrospective clinical and genomic epidemiology study
DOI: 10.1016/j.lanmic.2025.1011822025
Journal article
Temporal and geographical lineage dynamics of invasive Streptococcus pyogenes in Australia from 2011 to 2023: a retrospective, multicentre, clinical and genomic epidemiology study
DOI: 10.1016/j.lanmic.2024.1010532024
Journal article
Inter-species gene flow drives ongoing evolution of Streptococcus pyogenes and Streptococcus dysgalactiae subsp. equisimilis
DOI: 10.1038/s41467-024-46530-22024
Journal article
Overlapping Streptococcus pyogenes and Streptococcus dysgalactiae subspecies equisimilis household transmission and mobile genetic element exchange
DOI: 10.1038/s41467-024-47816-1
RECENT SCHOLARLY WORKS
2024
Journal article
Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
DOI: 10.7554/elife.98300.32024
Thesis / Dissertation
The clinical, epidemiological, and evolutionary intersection between Streptococcus dysgalactiae subspecies equisimilis and Streptococcus pyogenes
2024
Journal article
Streptococcus dysgalactiae subsp. equisimilis infection and its intersection with Streptococcus pyogenes
DOI: 10.1128/cmr.00175-23