Dr Ryan R Wick
Research Officer - Bioinformatics
Department of Microbiology and Immunology
77 Scholarly works
0 Projects
HIGHLIGHTS
2025
Journal article
Microbiota and resistome dynamics in untreated and treated wastewater: A ten-month study leveraging RNA-probe capture and subspecies-level metagenomics
DOI: 10.1016/j.jhazmat.2025.1405662025
Journal article
Challenges and considerations for whole-genome-based antimicrobial resistance plasmid investigations
DOI: 10.1128/aac.01097-252025
Journal article
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi
DOI: 10.1186/s13073-025-01551-42025
Journal article
Quantifying plasmid movement in drug-resistant Shigella species using phylodynamic inference
DOI: 10.1371/journal.ppat.10136212025
Journal article
Genomic and functional analysis of rmp locus variants in Klebsiella pneumoniae
DOI: 10.1186/s13073-025-01461-52025
Journal article
Autocycler: long-read consensus assembly for bacterial genomes
DOI: 10.1093/bioinformatics/btaf4742025
Journal article
Comparative and functional genomic analysis of foreign DNA defense mechanisms in Enterococcus faecium
DOI: 10.1128/spectrum.00289-25
RECENT SCHOLARLY WORKS
2025
Journal article
Transposon-directed insertion-site sequencing (TraDIS) analysis of Enterococcus faecium using nanopore sequencing and a WebAssembly analysis platform
DOI: 10.1128/spectrum.00628-252025
Journal article
Complete genomes of 568 diverse Klebsiella pneumoniae species complex isolates from humans, animals, and marine sources in Norway from 2001 to 2020
DOI: 10.1128/mra.00931-242025
Journal article
Are reads required? High-precision variant calling from bacterial genome assemblies
DOI: 10.1099/acmi.0.001025.v3