Dr Danielle Ingle
Senior Research Fellow
Department of Microbiology and Immunology
59 Scholarly works
3 Projects
HIGHLIGHTS
2026
Journal article
Exploration of the genomic diversity of third-generation cephalosporin-resistant Escherichia coli in Australian clinical settings
DOI: 10.1099/mgen.0.0015542026
Research grants (ARC, NHMRC, MRFF)
Harnessing Pathogen Genomics to Combat Current and Future Threats of Drug-Resistant Enteric Bacteria
2025
Journal article
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi
DOI: 10.1186/s13073-025-01551-42025
Journal article
Quantifying plasmid movement in drug-resistant Shigella species using phylodynamic inference
DOI: 10.1371/journal.ppat.10136212023
Internal Research Grant
Genomic Insights Into the Seventh Pandemic Cholera Agent in Australia and the Western Pacific
2021
Research grants (ARC, NHMRC, MRFF)
Enhancing Control of Enteric Bacteria Through Pathogen Genomics
2019
Journal article
Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era
DOI: 10.1038/s41467-019-12053-4
RECENT SCHOLARLY WORKS
2025
Journal article
The TyphiNET data visualisation dashboard: unlocking Salmonella Typhi genomics data to support public health
DOI: 10.1186/s13073-025-01470-42025
Journal article
Publisher Correction: Parameters for one health genomic surveillance of Escherichia coli from Australia (Nature Communications, (2025), 16, 1, (17), 10.1038/s41467-024-55103-2)
DOI: 10.1038/s41467-025-58600-02025
Journal article
Genomic-based approaches for surveillance of drug-resistant bacterial pathogens
DOI: 10.1071/MA250552025
Journal article
Global diversity and evolution of Salmonella enterica serovar Panama: a genomic epidemiology study
DOI: 10.1016/j.lanmic.2025.1011502025
Journal article
Salmonella pathogenicity islands in the genomic era
DOI: 10.1016/j.tim.2025.02.0072025
Journal article
Distinct adaptation and epidemiological success of different genotypes within Salmonella enterica serovar Dublin
DOI: 10.7554/elife.102253.42025
Journal article
Distinct adaptation and epidemiological success of different genotypes within Salmonella enterica serovar Dublin.
DOI: 10.7554/eLife.102253