Prof Torsten Seemann
Lead Bioinformatician, MDU PHL and DAMG
Department of Microbiology and Immunology
239 Scholarly works
13 Projects
HIGHLIGHTS
2026
Journal article
Rising burden of enterococcal bacteremia in Victoria, Australia: population-based incidence and antimicrobial resistance trends from three decades of surveillance
DOI: 10.1128/aac.01526-252026
Journal article
Advancing genomics for waterborne pathogen surveillance in Australia
DOI: 10.1016/j.lanwpc.2026.1018282020
Research Grant
Tracking Covid-19 Using Genomics
2019
Journal article
Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era
DOI: 10.1038/s41467-019-12053-42018
Journal article
Increasing tolerance of hospital Enterococcus faecium to handwash alcohols
DOI: 10.1126/scitranslmed.aar61152018
Research Grant
An Evidence Based Framework for Establishing Public Health Microbial Genomics in Australia
2018
Research grants (ARC, NHMRC, MRFF)
An Evidence Based Framework for Establishing Public Health Microbial Genomics in Australia
RECENT SCHOLARLY WORKS
2026
Journal article
Exploration of the genomic diversity of third-generation cephalosporin-resistant Escherichia coli in Australian clinical settings
DOI: 10.1099/mgen.0.0015542025
Journal article
BenchAMRking: a Galaxy-based platform for illustrating the major issues associated with current antimicrobial resistance (AMR) gene prediction workflows
DOI: 10.1186/s12864-024-11158-52025
Journal article
Publisher Correction: Parameters for one health genomic surveillance of Escherichia coli from Australia (Nature Communications, (2025), 16, 1, (17), 10.1038/s41467-024-55103-2)
DOI: 10.1038/s41467-025-58600-02025
Journal article
Bringing tuberculosis genomics to the clinic: development and validation of a comprehensive pipeline to predict antimicrobial susceptibility from genomic data, accredited to ISO standards
DOI: 10.1016/j.landig.2025.1009392025
Journal article
The impact of active screening strategies to identify and control multidrug-resistant organism transmission in healthcare settings
DOI: 10.1016/j.idh.2025.10.1172025
Journal article
Communicable diseases genomics network: promoting and harmonising pathogen genomics implementation for public health in Australia
DOI: 10.1016/j.lanwpc.2025.1016922025
Dataset
Trained weights for Barbet
DOI: 10.26188/295789642025
Journal article
Transposon-directed insertion-site sequencing (TraDIS) analysis of Enterococcus faecium using nanopore sequencing and a WebAssembly analysis platform
DOI: 10.1128/spectrum.00628-25