Dr Heejung Shim
Senior Lecturer in Statistical Genomics
School of Mathematics and Statistics
24 Scholarly works
1 Projects
HIGHLIGHTS
2026
Journal article
A human-induced pluripotent stem cell-derived spheroid model to investigate myelin injury and repair.
DOI: 10.1038/s41593-026-02457-z2026
Journal article
simPIC: flexible simulation of single-cell ATAC-seq paired-insertion counts from individuals to populations
DOI: 10.1186/s13059-026-04199-42025
Journal article
Spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis
DOI: 10.1038/s41588-025-02080-x2025
Journal article
A paradoxical population structure of var DBLα types in Africa
DOI: 10.1371/journal.ppat.10128132025
Journal article
A hierarchical, count-based model highlights challenges in scATAC-seq data analysis and points to opportunities to extract finer-resolution information
DOI: 10.1186/s13059-025-03735-y2025
Journal article
Semi-Supervised Learning Under General Causal Models
DOI: 10.1109/TNNLS.2024.33927502023
Research contracts (non-grants)
Using Differential Gene Expression Profiling to Characterise Oligodendrocyte Function in Development and Disease Using Human iPSC-derived Organoids
RECENT SCHOLARLY WORKS
2024
Journal article
MULTISCALE POISSON PROCESS APPROACHES FOR DETECTING AND ESTIMATING DIFFERENCES FROM HIGH-THROUGHPUT SEQUENCING ASSAYS
DOI: 10.1214/23-AOAS18282023
Journal article
Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
DOI: 10.1186/s13059-023-02907-y2023
Journal article
Unravelling var complexity: Relationship between DBLα types and var genes in Plasmodium falciparum.
DOI: 10.3389/fpara.2022.10063412023
Journal article
Sccomp: Robust differential composition and variability analysis for single-cell data
DOI: 10.1073/pnas.2203828120