Dr Michael Hall
Honorary (Fellow)
Department of Microbiology and Immunology
37 Scholarly works
0 Projects
HIGHLIGHTS
2026
Journal article
Efficient downsampling of genome alignments with Rasusa
DOI: 10.46471/gigabyte.1802025
Journal article
Genome size estimation from long read overlaps
DOI: 10.1093/bioinformatics/btaf5932025
Journal article
Sustainable data analysis with Snakemake
DOI: 10.12688/f1000research.29032.32025
Journal article
TBpore cluster: A novel phylogenetic pipeline for tuberculosis transmission studies using nanopore next-generation sequencing data
DOI: 10.1371/journal.pone.03259142025
Journal article
Sustainable data analysis with Snakemake
DOI: 10.12688/f1000research.29032.32025
Journal article
Genome graphs reveal the importance of structural variation in Mycobacterium tuberculosis evolution and drug resistance
DOI: 10.1038/s41467-025-65779-92024
Journal article
Pseudo-éclosion de Mycobacterium tuberculosis due à une contamination croisée en laboratoire : une investigation d'éclosion en épidémiologie moléculaire
DOI: 10.14745/ccdr.v50i12da03f
RECENT SCHOLARLY WORKS
2024
Journal article
Whole genome sequencing of M. tuberculosis for disease control in high-burden settings: study protocol for a cluster randomized controlled trial evaluating different community-wide intervention strategies in rural Madagascar
DOI: 10.1186/s13063-024-08537-42024
Journal article
Mycobacterium tuberculosis pseudo-outbreak due to laboratory cross-contamination: A molecular epidemiology outbreak investigation.
DOI: 10.14745/ccdr.v50i12da032024
Journal article
Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
DOI: 10.7554/elife.98300.3