Journal article

A linear mixed model spline framework for analysing time course 'Omics' data

J Straube, AD Gorse, BE Huang, KA Lê Cao

Plos One | PUBLIC LIBRARY SCIENCE | Published : 2015

Open access

Abstract

Time course 'omics' experiments are becoming increasingly important to study systemwide dynamic regulation. Despite their high information content, analysis remains challenging. 'Omics' technologies capture quantitative measurements on tens of thousands of molecules. Therefore, in a time course 'omics' experiment molecules are measured for multiple subjects over multiple time points. This results in a large, high-dimensional dataset, which requires computationally efficient approaches for statistical analysis. Moreover, methods need to be able to handle missing values and various levels of noise.We present a novel, robust and powerful framework to analyze time course 'omics' data that consis..

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University of Melbourne Researchers

Grants

Awarded by Australian Research Council


Funding Acknowledgements

This work was supported by the Wound Management Innovation established and supported under the Australian Government's Cooperative Research Centres Program to JS; the Australian Cancer Research Foundation for the Diamantina Individualised Oncology Care Centre at The University of Queensland Diamantina Institute to KALC; and the Australian Research Council Discovery Early Career Researcher Award (project number DE120101127) to EH. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.