Copy number analysis by low coverage whole genome sequencing using ultra low-input DNA from formalin-fixed paraffin embedded tumor tissue

Tanjina Kader; David L Goode; Stephen Q Wong; Jacquie Connaughton; Simone M Rowley; Lisa Devereux; David Byrne; Stephen B Fox; Gisela Mir Arnau; Richard W Tothill; Ian G Campbell; Kylie L Gorringe

Journal article

Copy number analysis by low coverage whole genome sequencing using ultra low-input DNA from formalin-fixed paraffin embedded tumor tissue

Tanjina Kader, David L Goode, Stephen Q Wong, Jacquie Connaughton, Simone M Rowley, Lisa Devereux, David Byrne, Stephen B Fox, Gisela Mir Arnau, Richard W Tothill, Ian G Campbell, Kylie L Gorringe

GENOME MEDICINE | BMC | Published : 2016

DOI: 10.1186/s13073-016-0375-z

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University of Melbourne Researchers

Kylie Gorringe Author The Sir Peter MacCallum Department of Oncology

Lisa Devereux Author The Sir Peter MacCallum Department of Oncology

Richard Tothill Author Clinical Pathology

Stephen Fox Author The Sir Peter MacCallum Department of Oncology

Ian Campbell Author The Sir Peter MacCallum Department of Oncology

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Grants

Awarded by Australian National Health and Medical Research Council (NHMRC)

Awarded by Peter MacCallum Cancer Foundation

Awarded by NHMRC Early Career Fellowship

Funding Acknowledgements

This study was funded by the Australian National Health and Medical Research Council (NHMRC APP1063092), the National Breast Cancer Foundation, and Peter MacCallum Cancer Foundation (1448). TK was supported by Melbourne International Research Scholarship and Melbourne International Fee Remission Scholarship and DLG was supported by a NHMRC Early Career Fellowship (APP1052904).