Journal article
Fast and flexible Bayesian species distribution modelling using Gaussian processes
N Golding, BV Purse
Methods in Ecology and Evolution | WILEY | Published : 2016
Abstract
Species distribution modelling (SDM) is widely used in ecology, and predictions of species distributions inform both policy and ecological debates. Therefore, methods with high predictive accuracy and those that enable biological interpretation are preferable. Gaussian processes (GPs) are a highly flexible approach to statistical modelling and have recently been proposed for SDM. GP models fit smooth, but potentially complex response functions that can account for high-dimensional interactions between predictors. We propose fitting GP SDMs using deterministic numerical approximations, rather than Markov chain Monte Carlo methods in order to make GPs more computationally efficient and easy to..
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Funding Acknowledgements
This work was funded by the NERC Centre for Ecology and Hydrology National Capability Allocation. We thank David Rogers, Miles Nunn, Luigi Sedda, Dave Harris, Bob O'Hara, Marianne Sinka, an associate editor and two reviewers who all provided helpful comments on the manuscript.