Journal article

Comparing individual-based approaches to modelling the self-organization of multicellular tissues

JM Osborne, AG Fletcher, JM Pitt-Francis, PK Maini, DJ Gavaghan

Plos Computational Biology | PUBLIC LIBRARY SCIENCE | Published : 2017

Open access

Abstract

The coordinated behaviour of populations of cells plays a central role in tissue growth and renewal. Cells react to their microenvironment by modulating processes such as movement, growth and proliferation, and signalling. Alongside experimental studies, computational models offer a useful means by which to investigate these processes. To this end a variety of cell-based modelling approaches have been developed, ranging from lattice-based cellular automata to lattice-free models that treat cells as point-like particles or extended shapes. However, it remains unclear how these approaches compare when applied to the same biological problem, and what differences in behaviour are due to differen..

View full abstract

University of Melbourne Researchers

Grants

Awarded by UK Research and Innovation


Funding Acknowledgements

JMO and AGF acknowledge funding from the Engineering and Physical Sciences Research Council (EPSRC https://www.epsrc.ac.uk/) through grant EP/I017909/1 awarded to PKM and DJG. JMO, AGF and JMPF acknowledge funding from the Biotechnology and Biological Sciences Research Council (BBSRC http://www.bbsrc.ac.uk/) through grant BB/D020190/1 awarded to PKM and DJG. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.