Journal article

Detecting Differential Expression in RNA-sequence Data Using Quasi-likelihood with Shrunken Dispersion Estimates

Steven P Lund, Dan Nettleton, Davis J McCarthy, Gordon K Smyth

Statistical Applications in Genetics and Molecular Biology | WALTER DE GRUYTER GMBH | Published : 2012

Grants

Awarded by National Research Initiative of the USDA-CSREES


Awarded by National Science Foundation


Awarded by National Health and Medical Research Council


Funding Acknowledgements

This work was supported by funding from the following sources: National Research Initiative of the USDA-CSREES Grant No. 2008-35600-18786 (to SPL and DN); National Science Foundation grant number 0820610 (to DN); General Sir John Monash Scholarship (to DJM); National Health and Medical Research Council Program Grant 490037 (to GKS). Disclaimer: The identification of any commercial products is given only for the sake of completely describing our experimental procedures. In no instance does such identification imply any recommendation by the National Institute of Standards and Technology; nor does it imply that the particular equipment identified is necessarily the best available for the described process. Steven P. Lund is also affiliated to Department of Statistics, Iowa State University. Davis J. McCarthy is also affiliated to Walter and Eliza Hall Institute of Medical Research. Gordon K. Smyth is also affiliated to Department of Mathematics and Statistics, University of Melbourne.