Manipulating the soil microbiome for improved nitrogen management

Abstract

The soil microbiome, including bacteria, archaea, fungi, viruses, and other microbial eukaryotes, has crucial roles in the biogeochemical cycling of nitrogen (N), the maintenance of soil fertility, and the plant N use efficiency (NUE) in agro-ecosystems1. Recent advances in omics-based technologies (e.g. metagenomics, metatranscriptomics, and metaproteomics) have expanded our understanding of the soil microbiome and their controls on specific N-cycling processes1–3. Given the growing N-based fertiliser consumption and continuous land degradation, innovative technologies are needed to manipulate the soil microbiome to improve crop NUE, reduce N losses and increase N reservation in soil. This ..