Journal article

A physical map of the mouse genome.

Simon G Gregory, Mandeep Sekhon, Jacqueline Schein, Shaying Zhao, Kazutoyo Osoegawa, Carol E Scott, Richard S Evans, Paul W Burridge, Tony V Cox, Christopher A Fox, Richard D Hutton, Ian R Mullenger, Kimbly J Phillips, James Smith, Jim Stalker, Glen J Threadgold, Ewan Birney, Kristine Wylie, Asif Chinwalla, John Wallis Show all

Nature | Published : 2002

Abstract

A physical map of a genome is an essential guide for navigation, allowing the location of any gene or other landmark in the chromosomal DNA. We have constructed a physical map of the mouse genome that contains 296 contigs of overlapping bacterial clones and 16,992 unique markers. The mouse contigs were aligned to the human genome sequence on the basis of 51,486 homology matches, thus enabling use of the conserved synteny (correspondence between chromosome blocks) of the two genomes to accelerate construction of the mouse map. The map provides a framework for assembly of whole-genome shotgun sequence data, and a tile path of clones for generation of the reference sequence. Definition of the h..

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