Journal article

Anaphoric reference in clinical reports: Characteristics of an annotated corpus

WW Chapman, GK Savova, J Zheng, M Tharp, R Crowley

Journal of Biomedical Informatics | ACADEMIC PRESS INC ELSEVIER SCIENCE | Published : 2012

Abstract

Motivation: Expressions that refer to a real-world entity already mentioned in a narrative are often considered anaphoric. For example, in the sentence " The pain comes and goes," the expression " the pain" is probably referring to a previous mention of pain. Interpretation of meaning involves resolving the anaphoric reference: deciding which expression in the text is the correct antecedent of the referring expression, also called an anaphor. We annotated a set of 180 clinical reports (surgical pathology, radiology, discharge summaries, and emergency department) from two institutions to indicate all anaphor-antecedent pairs. Objective: The objective of this study is to describe the character..

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University of Melbourne Researchers

Grants

Awarded by National Cancer Institute


Funding Acknowledgements

This work was funded by R01 CA127979. The ODIE toolkit - software for information extraction and ontology development. We are thankful to our annotators - Donna Ihrke, Pauline Funk, and Melissa Tharp - and to Lynette Hirschman, Cheryl Clark, and Kevin Cohen for excellent feedback. The work was conducted under IRB 08-007020 and REN09050055/PRO07070252.