Journal article

Analysis of Differential Gene Expression Based on Bayesian Estimation of Variance

Jiyuan An, John Lai, Lingzao Zeng, Colleen C Nelson

CURRENT BIOINFORMATICS | BENTHAM SCIENCE PUBL LTD | Published : 2016

Abstract

Gene expression is arguably the most important indicator of biological function. Thus identifying differentially expressed genes is one of the main aims of high throughout studies that use microarray and RNAseq platforms to study deregulated cellular pathways. There are many tools for analysing differentia gene expression from transciptomic datasets. The major challenge of this topic is to estimate gene expression variance due to the high amount of ‘background noise’ that is generated from biological equipment and the lack of biological replicates. Bayesian inference has been widely used in the bioinformatics field. In this work, we reveal that the prior knowledge employed in the Bayesian fr..

View full abstract

University of Melbourne Researchers

Grants

Funding Acknowledgements

This work is supported by the Australian Government Department of Health; the Movember Foundation and the Prostate Cancer Foundation of Australia through a Movember Revolutionary Team Award;, and a Queensland Government Smart Futures Premier's Fellowship (to CCN).