Journal article
Assessment of Coronavirus Disease 2019 Intervention Strategies in the Nordic Countries Using Genomic Epidemiology
S Duchene, L Featherstone, B Freiesleben De Blasio, EC Holmes, J Bohlin, JHO Pettersson
Open Forum Infectious Diseases | Published : 2022
DOI: 10.1093/ofid/ofab665
Abstract
We explored how the duration, size, and number of virus transmission clusters, defined as country-specific monophyletic groups in a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) phylogenetic tree, differed among the Nordic countries of Norway, Sweden, Denmark, Finland, and Iceland. Our results suggest that although geographical connectivity, population density, and openness influence the spread and the size of SARS-CoV-2 transmission clusters, the different country-specific intervention strategies had the largest impact. We also found a significant positive association between the size and duration of transmission clusters in the Nordic countries, suggesting that the rapid dep..
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Funding Acknowledgements
J. H.-O. P. is funded by the Swedish research council FORMAS (Grant Number 2015-710) and VR (Grant Number 2020-02593). E. C. H. is funded by an ARC Australian Laureate Fellowship (FL170100022). S. D. and L. F. are funded by an ARC Discovery Early Career Award (DE190100805; to S. D.). B. F. d. B. is funded by the Norwegian research council (Project Number 312721).