Book Chapter
Access and Visualise High Quality Gene Expression Data with Stemformatics
J Choi, CA Wells
Practical Guide to Life Science Databases | Springer Nature Singapore | Published : 2022
Abstract
Stemformatics is an established online gene expression data portal containing hundreds of carefully curated and annotated datasets. The website has recently been completely re-designed using the latest full stack technologies. It contains a suite of visualisation tools which enable easy exploration of the data, as well as an API server which can be used to access the data directly. One of Stemformatics’ key features is the integrated data atlas where the user can project their own data and classify their cell types against a reference. In addition to providing gene expression plots for each dataset, there are also tools for finding interesting genes across all datasets. Stemformatics is a fu..
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