Journal article
Efficient parallel all-electron four-component dirac-kohn-sham program using a distributed matrix approach II
L Storchi, S Rampino, L Belpassi, F Tarantelli, HM Quiney
Journal of Chemical Theory and Computation | AMER CHEMICAL SOC | Published : 2013
DOI: 10.1021/ct400752s
Abstract
We propose a new complete memory-distributed algorithm, which significantly improves the parallel implementation of the all-electron four-component Dirac-Kohn-Sham (DKS) module of BERTHA (J. Chem. Theory Comput. 2010, 6, 384). We devised an original procedure for mapping the DKS matrix between an efficient integral-driven distribution, guided by the structure of specific G-spinor basis sets and by density fitting algorithms, and the two-dimensional block-cyclic distribution scheme required by the ScaLAPACK library employed for the linear algebra operations. This implementation, because of the efficiency in the memory distribution, represents a leap forward in the applicability of the DKS pro..
View full abstractGrants
Awarded by FIRB-futuro-in-ricerca project
Awarded by Italian SuperComputing Resource Allocation (ISCRA)
Funding Acknowledgements
This work was supported by grants from the Italian MIUR and the FIRB-futuro-in-ricerca project RBFR1022UQ. We thank the Italian SuperComputing Resource Allocation (ISCRA) through the project HP10BT1TD8 (BERTHA) for computational resources and Filippo De Angelis for enlightening discussions. L.S. would like to acknowledge IIT-SEED 2009 HELYOS and ESCORT project for financial support.