Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases
Jun Zhang, Zhengshuang Hua, Zebo Huang, QiZhu Chen, Qingyun Long, David J Craik, Alan JM Baker, Wensheng Shu, Bin Liao
Planta | SPRINGER | Published : 2015
Awarded by National Natural Science Foundation of China
Awarded by Open Project of the State Key Laboratory of Biocontrol
Awarded by National Health and Medical Research Council (Australia) Senior Principal Research Fellowship
The authors would like to thank the CyBase administrators, Dr. CK Wang and Dr. Q Kaas, for assisting cyclotide structure analysis. This work was funded by the National Natural Science Foundation of China (Grant No. 31100198, 31170480 and U1201233) and by the Open Project of the State Key Laboratory of Biocontrol (SKLBC2010K04). DJC is funded by a National Health and Medical Research Council (Australia) Senior Principal Research Fellowship (APP1026501). We also thank Prof. AJM Baker (Universities of Melbourne and Queensland, Australia) for help in improving the final version of the manuscript.